Project name: Li33 [mutate: LL47P] [mutate: PL47L]

Status: done

submitted: 2018-10-11 09:53:53, status changed: 2018-10-11 09:59:29
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Chain sequence(s) H: EVQLESGGLVQGGSLRLSCAASGFTFSIMFWRQAPGKGLEWVSWIGPSGGITKYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTATYYCAREGHNDWYFDLWGRGTLVTVSS
L: DIQMTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLPIYDASNRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYDKWPLTFGGGTKVEIK
Distance of aggregation 10 Å
Dynamic mode No
Mutated residues PL47L
Energy difference between WT (input) and mutated protein (by FoldX) -7.50541 kcal/mol

Changes in protein stability upon mutation are calculated using the FoldX forcefield. Computational prediction of protein stability is used with the intention of preventing the experimental characterization of proteins bearing mutations that significantly destabilize their structure. Mutations resulting in a predicted reduction in protein stability ≥ 1 kcal/mol are considered disruptive.

Show buried residues

Minimal score value
-3.0669
Maximal score value
1.7977
Average score
-0.7543
Total score value
-165.9518

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.4758
2 V H -0.0866
3 Q H -1.2780
4 L H 0.0000
6 E H -1.0212
7 S H -0.9837
8 G H -0.8874
10 G H 0.4690
11 L H 1.1196
12 V H 0.0000
13 Q H -1.4174
15 G H -1.4811
16 G H -1.1827
17 S H -1.3340
18 L H -1.0908
19 R H -2.1530
20 L H 0.0000
21 S H -0.7942
22 C H 0.0000
23 A H -0.7670
24 A H 0.0000
25 S H -0.5639
26 G H -0.3329
27 F H 0.2753
28 T H 0.5247
29 F H 0.0000
30 S H 0.1933
31 I H 1.7977
34 M H 0.0000
35 F H 0.0000
36 W H 0.0000
38 R H 0.0000
39 Q H -0.9059
40 A H -1.2548
41 P H -1.1980
42 G H -1.4910
43 K H -2.3208
44 G H -1.4881
45 L H -0.9127
46 E H -1.1915
47 W H 0.0000
48 V H 0.0000
49 S H 0.0000
50 W H -0.0114
51 I H 0.0000
52 G H 0.0000
53 P H 0.3561
54 S H -0.0100
55 G H -0.2593
56 G H -0.1148
57 I H 0.6739
58 T H 0.0822
59 K H -0.8189
60 Y H -1.3170
61 A H 0.0000
62 D H -2.6004
63 S H -1.6085
64 V H 0.0000
65 K H -2.7418
66 G H -1.7407
67 R H -1.5434
68 F H 0.0000
69 T H -0.9456
70 I H 0.0000
71 S H -0.3878
72 R H -1.1958
73 D H -1.7952
74 N H -1.5937
75 S H -1.6895
76 K H -2.4323
77 N H -1.7895
78 T H 0.0000
79 L H 0.0000
80 Y H -0.6936
81 L H 0.0000
82 Q H -1.3850
83 M H 0.0000
84 N H -1.4432
85 S H -1.2729
86 L H 0.0000
87 R H -2.8423
88 A H -2.0018
89 E H -2.4422
90 D H 0.0000
91 T H -0.7419
92 A H 0.0000
93 T H 0.1384
94 Y H 0.0000
95 Y H 0.0000
96 C H 0.0000
97 A H 0.0000
98 R H -1.0016
99 E H -1.4609
100 G H 0.0000
101 H H -2.4771
102 N H -2.7348
103 D H -2.7889
104 W H -1.0796
105 Y H 0.0000
106 F H 0.0000
107 D H -1.4625
108 L H -0.5995
109 W H 0.0000
110 G H 0.0000
111 R H -2.3588
112 G H 0.0000
113 T H -0.1955
114 L H 0.9976
115 V H 0.0000
116 T H 0.0314
117 V H 0.0000
118 S H -0.7902
119 S H -0.5479
1 D L -2.5092
2 I L 0.0000
3 Q L -2.2624
4 M L 0.0000
5 T L -1.4305
6 Q L -1.1574
7 S L -1.0741
8 P L -0.4499
9 G L -0.6192
10 T L -0.6032
11 L L -0.4118
12 S L -0.7697
13 L L -1.3099
14 S L -1.7634
15 P L -2.1151
16 G L -1.9795
17 E L -2.9748
18 R L -3.0023
19 A L 0.0000
20 T L -0.5418
21 L L 0.0000
22 S L -1.1141
23 C L 0.0000
24 R L -3.0669
25 A L -2.1978
26 S L -1.9854
27 Q L -2.0633
28 S L -1.4380
29 V L 0.0000
30 S L -0.5898
31 S L -0.2874
32 Y L 0.0417
33 L L 0.0000
34 A L 0.0000
35 W L 0.0000
36 Y L 0.0000
37 Q L 0.0000
38 Q L 0.0000
39 K L -0.9649
40 P L -0.7679
41 G L -1.3381
42 Q L -1.7759
43 A L -1.4872
44 P L 0.0000
45 R L -1.2500
46 L L 0.0000
47 L L 0.0000 mutated: PL47L
48 I L 0.0000
49 Y L -0.7673
50 D L -0.9446
51 A L 0.0000
52 S L -1.1470
53 N L -1.7374
54 R L -1.7099
55 A L 0.0000
56 T L -0.6651
57 G L -0.6654
58 I L 0.0000
59 P L -0.4815
60 A L -0.4619
61 R L -0.8715
62 F L 0.0000
63 S L -0.7438
64 G L -0.8032
65 S L -0.9321
66 G L -1.3638
67 S L -1.2348
68 G L -1.1933
69 T L -2.0538
70 E L -2.9175
71 F L 0.0000
72 T L -0.9070
73 L L 0.0000
74 T L -0.6179
75 I L 0.0000
76 S L -1.6512
77 S L -1.9213
78 L L 0.0000
79 Q L -1.7475
80 S L -1.4907
81 E L -1.7930
82 D L 0.0000
83 F L -0.1851
84 A L 0.0000
85 V L -0.2192
86 Y L 0.0000
87 Y L 0.0000
88 C L 0.0000
89 Q L 0.0000
90 Q L 0.0000
91 Y L 0.0000
92 D L -0.8619
93 K L -1.8146
94 W L -0.7536
95 P L -0.9632
96 L L 0.0000
97 T L -0.9694
98 F L -0.3925
99 G L -0.8617
100 G L -1.0539
101 G L -0.7141
102 T L 0.0000
103 K L -0.7537
104 V L 0.0000
105 E L -1.3069
106 I L -1.4308
107 K L -1.7204

 

Laboratory of Theory of Biopolymers 2015