Project name: Tmab_glycosites

Status: done

submitted: 2020-06-19 11:47:23, status changed: 2020-06-23 09:19:14
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Chain sequence(s) A: DIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
C: PREYVNARHCLPCHPECQPQNGSVTCFGPEADQCVACAHYKDPPFCVARCPSIWKFPDEEGACQPCPIN
B: EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
Distance of aggregation 10 Å
Dynamic mode No
Show buried residues

Minimal score value
-3.9208
Maximal score value
2.3404
Average score
-0.6817
Total score value
-342.9025

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.1881
2 I A -1.8331
3 Q A -2.0881
4 M A 0.0000
5 T A -1.3529
6 Q A 0.0000
7 S A -0.8555
8 P A -0.5678
9 S A -0.7710
10 S A -0.6556
11 L A -0.5720
12 S A -1.0667
13 A A -1.0714
14 S A -0.8978
15 V A 0.2493
16 G A -0.5508
17 D A -1.5891
18 R A -2.3077
19 V A 0.0000
20 T A -0.6412
21 I A 0.0000
22 T A -0.7423
23 C A 0.0000
24 R A -2.7602
25 A A 0.0000
26 S A -2.1796
27 Q A -2.8240
28 D A -2.6400
29 V A 0.0000
30 N A 0.0000
31 T A -0.4763
32 A A 0.0000
33 V A 0.0000
34 A A 0.0000
35 W A 0.0000
36 Y A 0.0000
37 Q A 0.0000
38 Q A 0.0000
39 K A -1.7290
40 P A -1.5169
41 G A -1.7502
42 K A -2.5818
43 A A -1.7015
44 P A 0.0000
45 K A -1.9050
46 L A 0.0000
47 L A 0.0000
48 I A 0.0000
49 Y A 0.5684
50 S A 0.1913
51 A A 0.0000
52 S A 0.0665
53 F A 0.7377
54 L A 0.8052
55 Y A 0.2236
56 S A -0.1776
57 G A -0.4715
58 V A 0.0000
59 P A -0.3624
60 S A -0.3875
61 R A -0.7347
62 F A 0.0000
63 S A -0.1329
64 G A -0.1838
65 S A -0.7582
66 R A -1.4235
67 S A -1.1631
68 G A -1.5620
69 T A -1.9323
70 D A -1.7169
71 F A 0.0000
72 T A -0.7239
73 L A 0.0000
74 T A -0.6347
75 I A 0.0000
76 S A -1.4445
77 S A -1.0936
78 L A 0.0000
79 Q A -0.9348
80 P A -1.5325
81 E A -1.5601
82 D A 0.0000
83 F A 0.0000
84 A A 0.0000
85 T A -0.7045
86 Y A 0.0000
87 Y A 0.0000
88 C A 0.0000
89 Q A 0.0000
90 Q A 0.0000
91 H A 0.0000
92 Y A -0.1577
93 T A -0.4102
94 T A -0.3365
95 P A -0.5556
96 P A 0.0000
97 T A -0.6551
98 F A -0.4738
99 G A 0.0000
100 Q A -1.7280
101 G A 0.0000
102 T A 0.0000
103 K A -1.1708
104 V A 0.0000
105 E A -1.5489
106 I A 0.0000
107 K A -1.6600
108 R A -1.2352
109 T A -0.2553
110 V A 0.3216
111 A A -0.0011
112 A A -0.0186
113 P A 0.0000
114 S A -0.1239
115 V A 0.0000
116 F A 0.0000
117 I A 0.0000
118 F A 0.0000
119 P A -0.6744
120 P A 0.0000
121 S A -1.5468
122 D A -2.9159
123 E A -2.8725
124 Q A 0.0000
125 L A -2.2436
126 K A -2.7720
127 S A -1.7675
128 G A -1.4982
129 T A -1.1464
130 A A 0.0000
131 S A 0.0000
132 V A 0.0000
133 V A 0.0000
134 C A 0.0000
135 L A 0.0000
136 L A 0.0000
137 N A 0.0000
138 N A -0.8979
139 F A 0.0000
140 Y A 0.0000
141 P A -1.7212
142 R A -2.7142
143 E A -3.1257
144 A A -2.3985
145 K A -2.6983
146 V A -1.6947
147 Q A -1.5005
148 W A 0.0000
149 K A -1.0398
150 V A 0.0000
151 D A -2.1468
152 N A -1.6545
153 A A -0.4033
154 L A 0.4442
155 Q A -0.4625
156 S A -0.7548
157 G A -1.1165
158 N A -1.2276
159 S A -1.4718
160 Q A -1.5787
161 E A -2.1520
162 S A -1.0826
163 V A -1.0531
164 T A -1.1760
165 E A -2.3353
166 Q A 0.0000
167 D A -2.1985
168 S A -2.2351
169 K A -2.7033
170 D A -2.2385
171 S A 0.0000
172 T A 0.0000
173 Y A -1.3928
174 S A 0.0000
175 L A 0.0000
176 S A 0.0000
177 S A 0.0000
178 T A -0.7178
179 L A 0.0000
180 T A -0.6483
181 L A -0.9795
182 S A -1.3747
183 K A -2.4985
184 A A -2.3731
185 D A -3.2274
186 Y A 0.0000
187 E A -3.8499
188 K A -3.9208
189 H A -3.2362
190 K A -2.8290
191 V A -1.2860
192 Y A 0.0000
193 A A 0.0000
194 C A 0.0000
195 E A -1.3612
196 V A 0.0000
197 T A -1.3521
198 H A 0.0000
199 Q A -1.7252
200 G A -0.3352
201 L A -0.1600
202 S A -0.4190
203 S A -0.4225
204 P A -0.6899
205 V A -0.1943
206 T A -0.7249
207 K A -1.0232
208 S A -0.9752
209 F A 0.0000
210 N A -1.9777
211 R A -2.4952
212 G A -2.0932
213 E A -2.2350
214 C A -0.6080
1 E B -2.0475
2 V B -1.3819
3 Q B -1.3786
4 L B 0.0000
5 V B 0.2728
6 E B 0.0000
7 S B -0.6208
8 G B -0.9441
9 G B -0.8031
10 G B -0.4454
11 L B -0.2204
12 V B 0.0000
13 Q B -1.7106
14 P B -1.5856
15 G B -1.4578
16 G B -1.2272
17 S B -1.4130
18 L B -1.2573
19 R B -2.1788
20 L B 0.0000
21 S B -0.5322
22 C B 0.0000
23 A B -0.3485
24 A B 0.0000
25 S B -1.1472
26 G B -1.3186
27 F B -1.5012
28 N B -2.4828
29 I B 0.0000
30 K B -2.7825
31 D B -3.0668
32 T B 0.0000
33 Y B -0.5725
34 I B 0.0000
35 H B 0.0000
36 W B 0.0000
37 V B 0.0000
38 R B 0.0000
39 Q B -0.8073
40 A B -1.1620
41 P B -0.9616
42 G B -1.4721
43 K B -2.3976
44 G B -1.6579
45 L B 0.0000
46 E B -1.0990
47 W B 0.0000
48 V B 0.0000
49 A B 0.0000
50 R B 0.0000
51 I B 0.0000
52 Y B -0.4898
53 P B 0.0000
54 T B -1.3767
55 N B -1.2015
56 G B -0.7736
57 Y B 0.0731
58 T B 0.0036
59 R B -0.5038
60 Y B -0.9952
61 A B -1.4847
62 D B -2.4538
63 S B -1.8111
64 V B 0.0000
65 K B -2.6424
66 G B -1.8203
67 R B -1.5131
68 F B 0.0000
69 T B -1.0067
70 I B 0.0000
71 S B -0.2356
72 A B -0.8950
73 D B -1.4962
74 T B -1.6450
75 S B -1.5896
76 K B -2.2568
77 N B -1.8492
78 T B 0.0000
79 A B 0.0000
80 Y B -0.5968
81 L B 0.0000
82 Q B -1.4268
83 M B 0.0000
84 N B -1.6011
85 S B -1.3904
86 L B 0.0000
87 R B -2.8407
88 A B -1.9591
89 E B -2.3961
90 D B 0.0000
91 T B -0.8162
92 A B 0.0000
93 V B 0.1466
94 Y B 0.0000
95 Y B 0.0000
96 C B 0.0000
97 S B 0.0000
98 R B -0.2418
99 W B 0.0000
100 G B 0.0000
101 G B -0.9924
102 D B -1.7856
103 G B 0.0000
104 F B 0.0091
105 Y B -0.1102
106 A B 0.0000
107 M B 0.0000
108 D B -0.3237
109 Y B -0.5972
110 W B -0.6520
111 G B 0.0000
112 Q B -1.5425
113 G B -0.7303
114 T B -0.1862
115 L B 0.0874
116 V B 0.0000
117 T B -0.5656
118 V B 0.0000
119 S B -0.9059
120 S B -0.7194
121 A B -0.4792
122 S B -0.5907
123 T B -0.6217
124 K B -1.0826
125 G B -1.3529
126 P B -0.6522
127 S B -0.4990
128 V B 0.0000
129 F B 0.0000
130 P B -1.0805
131 L B 0.0000
132 A B -0.8407
133 P B 0.0000
134 S B -0.7852
135 S B -0.9684
136 K B -1.6006
137 S B 0.0000
138 T B -0.8477
139 S B -0.7550
140 G B -0.8127
141 G B -0.8809
142 T B -0.6084
143 A B 0.0000
144 A B 0.0000
145 L B 0.0000
146 G B 0.0000
147 C B 0.0000
148 L B 0.0000
149 V B 0.0000
150 K B 0.0000
151 D B -0.6120
152 Y B 0.0000
153 F B 0.0000
154 P B 0.0000
155 E B -0.3955
156 P B -0.5929
157 V B -0.3893
158 T B -0.4933
159 V B -0.2613
160 S B -0.3272
161 W B 0.0000
162 N B -0.7551
163 S B -0.6413
164 G B -0.4995
165 A B -0.2274
166 L B 0.0044
167 T B -0.1570
168 S B -0.1584
169 G B -0.1785
170 V B 0.1919
171 H B -0.3378
172 T B -0.1561
173 F B 0.0000
174 P B -0.3952
175 A B 0.1894
176 V B 0.4208
177 L B 0.9858
178 Q B 0.1995
179 S B -0.0952
180 S B -0.2529
181 G B -0.0366
182 L B 0.0277
183 Y B 0.3826
184 S B 0.0000
185 L B 0.0000
186 S B 0.0000
187 S B 0.0000
188 V B 0.0000
189 V B 0.0000
190 T B -0.1213
191 V B 0.0000
192 P B -0.5908
193 S B -0.6172
194 S B -0.5220
195 S B -0.4731
196 L B -0.6258
197 G B -0.9567
198 T B -0.6119
199 Q B -1.0227
200 T B -1.0268
201 Y B 0.0000
202 I B -1.3232
203 C B 0.0000
204 N B 0.0000
205 V B 0.0000
206 N B -1.7477
207 H B 0.0000
208 K B -2.6849
209 P B -1.5495
210 S B -1.7995
211 N B -2.4109
212 T B -2.0232
213 K B -2.6757
214 V B -1.7784
215 D B -2.5399
216 K B -2.2052
217 K B -2.4620
218 V B 0.0000
219 E B -2.0461
220 P B -0.9224
529 P C -1.3501
530 R C -2.0201
531 E C -1.4200
532 Y C 0.3054
533 V C 0.6076
534 N C -0.9753
535 A C -1.1913
536 R C -1.9326
537 H C -1.4834
538 C C -0.2777
539 L C -0.4573
540 P C -0.9315
541 C C 0.0000
542 H C -1.0095
543 P C -0.9800
544 E C -0.6632
545 C C 0.0000
546 Q C -1.0703
547 P C -1.0614
548 Q C -0.8066
549 N C -1.4516
550 G C -0.8672
551 S C 0.0780
552 V C 1.3921
553 T C 0.0000
554 C C 0.0000
555 F C 2.2742
556 G C 0.0000
557 P C 0.1305
558 E C 0.0000
559 A C 0.0000
560 D C 0.1037
561 Q C 0.5720
562 C C 0.7968
563 V C 1.2671
564 A C 0.1020
565 C C -0.1513
566 A C -0.5696
567 H C -1.1311
568 Y C -0.6470
569 K C -0.6563
570 D C 0.0000
571 P C 0.0000
572 P C 0.0000
573 F C 0.0000
574 C C 0.0000
575 V C -0.5118
576 A C -0.9677
577 R C -1.7531
578 C C 0.0000
579 P C 0.1164
580 S C 0.6170
591 I C 2.1040
592 W C 2.3404
593 K C 0.0000
594 F C 0.6585
595 P C -0.8084
596 D C -1.6608
597 E C -2.8224
598 E C -2.8205
599 G C -1.6361
600 A C 0.0000
601 C C 0.0000
602 Q C 0.0219
603 P C 0.0000
604 C C 1.3008
605 P C 0.8178
606 I C 1.4878
607 N C 0.1721

 

Laboratory of Theory of Biopolymers 2015