Project name: Chain A E38A-2 [mutate: EA38A, EB38A]

Status: done

submitted: 2020-01-21 01:40:50, status changed: 2020-01-21 02:02:38
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Chain sequence(s) A: MQDPYVKEAENLKKYFNAGHSDVADNGTLFLGILKNWKEESDRKIMQSQIVSFYFKLFKNFKDDQSIQKSVETIKEDMNVKFFNSNKKKRDDFEKLTNYSVTDLNVQRKAIHELIQVMAELSPAAKT
B: MQDPYVKEAENLKKYFNAGHSDVADNGTLFLGILKNWKEESDRKIMQSQIVSFYFKLFKNFKDDQSIQKSVETIKEDMNVKFFNSNKKKRDDFEKLTNYSVTDLNVQRKAIHELIQVMAELSPAAKT
Distance of aggregation 10 Å
Dynamic mode No
Mutated residues EA38A, EB38A
Energy difference between WT (input) and mutated protein (by FoldX) 0.505198 kcal/mol

Changes in protein stability upon mutation are calculated using the FoldX forcefield. Computational prediction of protein stability is used with the intention of preventing the experimental characterization of proteins bearing mutations that significantly destabilize their structure. Mutations resulting in a predicted reduction in protein stability ≥ 1 kcal/mol are considered disruptive.

Show buried residues

Minimal score value
-3.9592
Maximal score value
0.4916
Average score
-1.1937
Total score value
-303.1965

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
0 M A -0.0315
1 Q A -1.7773
2 D A -2.4148
3 P A -1.6213
4 Y A 0.0000
5 V A -1.7585
6 K A -2.3813
7 E A 0.0000
8 A A 0.0000
9 E A -2.4722
10 N A -2.0458
11 L A 0.0000
12 K A -2.2370
13 K A -2.5822
14 Y A -0.7415
15 F A -1.0450
16 N A -2.0643
17 A A 0.0000
18 G A -2.2078
19 H A -2.2075
20 S A -1.8117
21 D A -2.5827
22 V A 0.0000
23 A A -1.9920
24 D A -2.9673
25 N A -2.5524
26 G A -1.5691
27 T A -0.8740
28 L A 0.0000
29 F A 0.0000
30 L A -0.7491
31 G A -0.9281
32 I A 0.0000
33 L A 0.0000
34 K A -2.5437
35 N A -2.0729
36 W A 0.0000
37 K A -2.9593
38 A A -1.9025 mutated: EA38A
39 E A -2.5964
40 S A -1.5292
41 D A -1.3650
42 R A -1.9561
43 K A 0.0000
44 I A 0.0000
45 M A 0.0000
46 Q A 0.0000
47 S A 0.0000
48 Q A 0.0000
49 I A 0.0000
50 V A 0.0000
51 S A -0.5647
52 F A 0.0000
53 Y A 0.0000
54 F A -1.2636
55 K A -2.1636
56 L A 0.0000
57 F A 0.0000
58 K A -3.3042
59 N A -2.9678
60 F A -2.6062
61 K A -3.3022
62 D A -3.3442
63 D A -2.7343
64 Q A -2.5922
65 S A -1.5229
66 I A 0.0000
67 Q A -2.4918
68 K A -2.6397
69 S A 0.0000
70 V A 0.0000
71 E A -3.2260
72 T A -2.3700
73 I A 0.0000
74 K A -2.2772
75 E A -2.5241
76 D A -1.7159
77 M A 0.0000
78 N A -1.4704
79 V A -0.6377
80 K A -0.9550
81 F A 0.0000
82 F A 0.0000
83 N A -1.6691
84 S A -1.7709
85 N A -2.6003
86 K A -3.3650
87 K A -3.3666
88 K A 0.0000
89 R A -2.9084
90 D A -3.2530
91 D A 0.0000
92 F A 0.0000
93 E A -2.6423
94 K A -2.7504
95 L A 0.0000
96 T A -1.6713
97 N A -1.9136
98 Y A -0.9640
99 S A -0.5057
100 V A -0.5267
101 T A -0.4380
102 D A -0.5760
103 L A 0.4460
104 N A -0.9868
105 V A -0.3975
106 Q A 0.0000
107 R A -1.2192
108 K A -1.3070
109 A A 0.0000
110 I A 0.0000
111 H A -1.3980
112 E A 0.0000
113 L A 0.0000
114 I A -0.9247
115 Q A -1.3184
116 V A 0.0000
117 M A 0.0000
118 A A -1.1178
119 E A -1.4803
120 L A 0.0000
121 S A -0.7164
122 P A -0.7586
123 A A -0.9699
124 A A -1.0780
125 K A -1.6985
126 T A -0.8818
0 M B -0.0072
1 Q B -1.9368
2 D B -2.5378
3 P B -1.7621
4 Y B 0.0000
5 V B 0.0000
6 K B -2.7778
7 E B 0.0000
8 A B 0.0000
9 E B -2.4385
10 N B -1.9329
11 L B 0.0000
12 K B 0.0000
13 K B -2.4262
14 Y B -0.6126
15 F B -0.9005
16 N B -2.2207
17 A B 0.0000
18 G B -2.1382
19 H B -2.2786
20 S B -1.7219
21 D B -2.7001
22 V B 0.0000
23 A B -2.0232
24 D B -2.9867
25 N B -2.5578
26 G B -1.5697
27 T B -0.8898
28 L B 0.0000
29 F B 0.0000
30 L B -0.8471
31 G B -0.9524
32 I B 0.0000
33 L B 0.0000
34 K B -2.4108
35 N B -2.1581
36 W B 0.0000
37 K B -2.3503
38 A B -1.1346 mutated: EB38A
39 E B -1.2470
40 S B -1.1259
41 D B -0.9745
42 R B 0.0000
43 K B 0.0000
44 I B 0.0000
45 M B 0.0000
46 Q B 0.0000
47 S B 0.0000
48 Q B 0.0000
49 I B 0.0000
50 V B 0.0000
51 S B -0.5315
52 F B 0.0000
53 Y B 0.0000
54 F B -1.1716
55 K B -2.0312
56 L B 0.0000
57 F B 0.0000
58 K B -3.3595
59 N B -2.8572
60 F B -2.7459
61 K B -3.9592
62 D B -3.5430
63 D B -2.8053
64 Q B -2.6512
65 S B -1.5488
66 I B 0.0000
67 Q B -2.8434
68 K B -2.7945
69 S B 0.0000
70 V B 0.0000
71 E B -3.4863
72 T B -2.5678
73 I B 0.0000
74 K B -2.5175
75 E B -2.6210
76 D B -1.7481
77 M B 0.0000
78 N B -1.4658
79 V B -0.5419
80 K B -0.8744
81 F B 0.0000
82 F B 0.0000
83 N B -1.6402
84 S B -1.7046
85 N B -2.6248
86 K B -3.3720
87 K B -3.2957
88 K B 0.0000
89 R B -3.0062
90 D B -3.5639
91 D B 0.0000
92 F B 0.0000
93 E B -2.7496
94 K B -2.7633
95 L B 0.0000
96 T B -1.6761
97 N B -1.8795
98 Y B -0.9596
99 S B -0.4985
100 V B -0.5618
101 T B -0.4697
102 D B -0.5571
103 L B 0.4916
104 N B -0.8383
105 V B -0.3817
106 Q B -0.3191
107 R B -1.2169
108 K B -1.2908
109 A B 0.0000
110 I B 0.0000
111 H B -1.3984
112 E B 0.0000
113 L B 0.0000
114 I B -0.7786
115 Q B -1.0328
116 V B 0.0000
117 M B 0.0000
118 A B -1.0551
119 E B -1.8960
120 L B 0.0000
121 S B -0.9923
122 P B -1.4536
123 A B -1.2912
124 A B -0.8173
125 K B -1.7182
126 T B -1.6589

 

Laboratory of Theory of Biopolymers 2015