Chain sequence(s) |
R: VECDFSPLLSGTPPQVYNFKRLVFTNCNYNLTKLLSLFSVNDFTCSQISPAAIASNCYSSLILDYFSYPLSMKSDLSVSSAGPISQFNYKQSFSNPTCLILATVPHNLTTITKPLKYSYINKCSRFLSDDRTEVPQLVNANQYSPCVSIVPSTVWEDGDYYRKQLSPLEGGGWLVASGSTVAMTEQLQMGFGITVQYGTDTNSVCPKL
input PDB |
Selected Chain(s) | R |
Distance of aggregation | 10 Å |
FoldX usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with R chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00) [INFO] Movie: Creting movie with webm format (00:01:49) [INFO] Main: Simulation completed successfully. (00:01:51) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
381 | V | R | 0.5451 | |
382 | E | R | -1.1409 | |
383 | C | R | 0.0000 | |
384 | D | R | -1.8619 | |
385 | F | R | -0.8532 | |
386 | S | R | -0.7005 | |
387 | P | R | -0.7273 | |
388 | L | R | 0.0000 | |
389 | L | R | 0.1496 | |
390 | S | R | -0.3884 | |
391 | G | R | -0.7638 | |
392 | T | R | -0.5147 | |
393 | P | R | 0.0000 | |
394 | P | R | 0.0000 | |
395 | Q | R | 0.0000 | |
396 | V | R | 0.0000 | |
397 | Y | R | 0.0000 | |
398 | N | R | -0.4730 | |
399 | F | R | 0.0000 | |
400 | K | R | -1.7868 | |
401 | R | R | -0.8791 | |
402 | L | R | 0.3148 | |
403 | V | R | 1.7668 | |
404 | F | R | 0.0000 | |
405 | T | R | -0.2565 | |
406 | N | R | -1.3136 | |
407 | C | R | -0.7717 | |
408 | N | R | -0.4194 | |
409 | Y | R | 0.0000 | |
410 | N | R | -0.7748 | |
411 | L | R | -0.2040 | |
412 | T | R | -0.4509 | |
413 | K | R | -1.2701 | |
414 | L | R | 0.1331 | |
415 | L | R | 0.7273 | |
416 | S | R | 0.3690 | |
417 | L | R | 0.8737 | |
418 | F | R | 0.5970 | |
419 | S | R | 0.1155 | |
420 | V | R | 0.5456 | |
421 | N | R | -0.4850 | |
422 | D | R | -0.2912 | |
423 | F | R | 1.5259 | |
424 | T | R | 1.0876 | |
425 | C | R | 1.0106 | |
426 | S | R | -0.0055 | |
427 | Q | R | -0.9706 | |
428 | I | R | -0.0202 | |
429 | S | R | -0.3884 | |
430 | P | R | -0.3106 | |
431 | A | R | -0.0284 | |
432 | A | R | 0.1279 | |
433 | I | R | 0.4697 | |
434 | A | R | -0.0098 | |
435 | S | R | -0.0884 | |
436 | N | R | -0.3722 | |
437 | C | R | -0.1058 | |
438 | Y | R | 0.0000 | |
439 | S | R | -0.7559 | |
440 | S | R | 0.0000 | |
441 | L | R | 0.0000 | |
442 | I | R | 0.0000 | |
443 | L | R | 0.0000 | |
444 | D | R | 0.0000 | |
445 | Y | R | 0.0000 | |
446 | F | R | 0.0000 | |
447 | S | R | 0.0000 | |
448 | Y | R | 0.0000 | |
449 | P | R | 0.0000 | |
450 | L | R | -0.4568 | |
451 | S | R | -0.4027 | |
452 | M | R | -0.6094 | |
453 | K | R | -1.2743 | |
454 | S | R | -0.8173 | |
455 | D | R | -0.6978 | |
456 | L | R | -0.2559 | |
457 | S | R | 0.1602 | |
458 | V | R | 1.4958 | |
459 | S | R | 0.4985 | |
460 | S | R | 0.1554 | |
461 | A | R | 0.0219 | |
462 | G | R | -0.3345 | |
463 | P | R | -0.4851 | |
464 | I | R | 0.0000 | |
465 | S | R | -0.2247 | |
466 | Q | R | -0.4250 | |
467 | F | R | 0.0000 | |
468 | N | R | 0.0000 | |
469 | Y | R | 0.0000 | |
470 | K | R | -0.6907 | |
471 | Q | R | -0.2706 | |
472 | S | R | 0.0980 | |
473 | F | R | 1.7546 | |
474 | S | R | 0.3305 | |
475 | N | R | -0.0244 | |
476 | P | R | 0.0000 | |
477 | T | R | 0.0000 | |
478 | C | R | 0.0000 | |
479 | L | R | 0.8945 | |
480 | I | R | 0.9675 | |
481 | L | R | 0.0000 | |
482 | A | R | 0.0000 | |
483 | T | R | -0.1079 | |
484 | V | R | 0.0000 | |
485 | P | R | -0.7475 | |
486 | H | R | -1.5905 | |
487 | N | R | -1.5095 | |
488 | L | R | -0.5497 | |
489 | T | R | -0.7272 | |
490 | T | R | -0.4484 | |
491 | I | R | 0.0000 | |
492 | T | R | -0.6906 | |
493 | K | R | -1.3499 | |
494 | P | R | -0.0891 | |
495 | L | R | 1.1952 | |
496 | K | R | 0.1891 | |
497 | Y | R | 0.0000 | |
498 | S | R | 0.0000 | |
499 | Y | R | -0.2686 | |
500 | I | R | 0.0000 | |
501 | N | R | -1.0277 | |
502 | K | R | -0.8308 | |
503 | C | R | 0.0000 | |
504 | S | R | 0.0000 | |
505 | R | R | -0.3849 | |
506 | F | R | -0.5643 | |
507 | L | R | 0.1414 | |
508 | S | R | -1.3077 | |
509 | D | R | -2.6217 | |
510 | D | R | -3.1857 | |
511 | R | R | -3.0954 | |
512 | T | R | -1.6980 | |
513 | E | R | -1.3435 | |
514 | V | R | 0.3224 | |
515 | P | R | -0.0086 | |
516 | Q | R | 0.0683 | |
517 | L | R | 0.7685 | |
518 | V | R | 0.0000 | |
519 | N | R | -1.4535 | |
520 | A | R | -0.8164 | |
521 | N | R | -0.9434 | |
522 | Q | R | -1.4591 | |
523 | Y | R | -0.2654 | |
524 | S | R | 0.0000 | |
525 | P | R | 0.0540 | |
526 | C | R | 0.0000 | |
527 | V | R | 0.5815 | |
528 | S | R | -0.0214 | |
529 | I | R | -0.3359 | |
530 | V | R | 0.0000 | |
531 | P | R | 0.1793 | |
532 | S | R | -0.0533 | |
533 | T | R | 0.0875 | |
534 | V | R | 0.0000 | |
535 | W | R | -0.1477 | |
536 | E | R | -2.2447 | |
537 | D | R | -2.5671 | |
538 | G | R | -1.6314 | |
539 | D | R | -0.8682 | |
540 | Y | R | 0.1725 | |
541 | Y | R | -0.4863 | |
542 | R | R | -2.3621 | |
543 | K | R | -2.8982 | |
544 | Q | R | -2.4356 | |
545 | L | R | -1.2940 | |
546 | S | R | -0.8020 | |
547 | P | R | -0.4592 | |
548 | L | R | 0.3708 | |
549 | E | R | -1.4547 | |
550 | G | R | -0.6851 | |
551 | G | R | -0.5774 | |
552 | G | R | 0.0000 | |
553 | W | R | -1.3614 | |
554 | L | R | 0.0000 | |
555 | V | R | -0.8593 | |
556 | A | R | 0.0000 | |
557 | S | R | 0.0000 | |
558 | G | R | 0.0000 | |
559 | S | R | -1.1614 | |
560 | T | R | -0.8104 | |
561 | V | R | -0.0371 | |
562 | A | R | -0.0130 | |
563 | M | R | -0.1861 | |
564 | T | R | -0.8945 | |
565 | E | R | -2.0507 | |
566 | Q | R | -1.5108 | |
567 | L | R | 0.0000 | |
568 | Q | R | -0.6026 | |
569 | M | R | 0.0000 | |
570 | G | R | 0.0000 | |
571 | F | R | 0.0000 | |
572 | G | R | 0.0000 | |
573 | I | R | 0.5327 | |
574 | T | R | 0.0000 | |
575 | V | R | 0.0000 | |
576 | Q | R | -0.1780 | |
577 | Y | R | 0.3974 | |
578 | G | R | -0.6584 | |
579 | T | R | -1.0818 | |
580 | D | R | -2.0692 | |
581 | T | R | -1.6423 | |
582 | N | R | -1.7033 | |
583 | S | R | -1.1286 | |
584 | V | R | 0.0000 | |
585 | C | R | -0.2158 | |
586 | P | R | 0.0933 | |
587 | K | R | 0.1619 | |
588 | L | R | 1.1724 |