Chain sequence(s) |
H: QVQLQQPGSVLVRPGASVKLSCKASGYTFTSSWMHWTKQRPGQGLEWIGEIHPSSGNTHYNEKFKDKATLTVDTSSTTAYVDLSSLTSEDSAVYYCARTGHYFDYWGQGTTLTVSS
L: EIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQGDTLPFTFGSGTKLEVK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:51) [INFO] Main: Simulation completed successfully. (00:00:53) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.5402 | |
2 | V | H | -1.2139 | |
3 | Q | H | -2.0449 | |
4 | L | H | 0.0000 | |
5 | Q | H | -2.1886 | |
6 | Q | H | 0.0000 | |
7 | P | H | -0.8684 | |
8 | G | H | -0.7958 | |
9 | S | H | 0.1064 | |
11 | V | H | 0.7661 | |
12 | L | H | 1.3172 | |
13 | V | H | -0.0261 | |
14 | R | H | -1.7922 | |
15 | P | H | -1.4585 | |
16 | G | H | -1.1617 | |
17 | A | H | -0.9160 | |
18 | S | H | -0.9965 | |
19 | V | H | -0.6780 | |
20 | K | H | -1.4683 | |
21 | L | H | 0.0000 | |
22 | S | H | -0.7339 | |
23 | C | H | 0.0000 | |
24 | K | H | -1.5858 | |
25 | A | H | 0.0000 | |
26 | S | H | -1.2323 | |
27 | G | H | -1.0500 | |
28 | Y | H | -0.4137 | |
29 | T | H | -0.1367 | |
30 | F | H | 0.0000 | |
35 | T | H | -0.2845 | |
36 | S | H | -0.2434 | |
37 | S | H | 0.0000 | |
38 | W | H | -0.1816 | |
39 | M | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | T | H | 0.0000 | |
43 | K | H | 0.0000 | |
44 | Q | H | -0.6848 | |
45 | R | H | -1.2949 | |
46 | P | H | -0.9771 | |
47 | G | H | -1.2679 | |
48 | Q | H | -1.6622 | |
49 | G | H | -1.0059 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.6605 | |
52 | W | H | 0.0000 | |
53 | I | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | E | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | H | H | -0.7502 | |
58 | P | H | 0.0000 | |
59 | S | H | -0.7080 | |
62 | S | H | -0.9337 | |
63 | G | H | -1.2231 | |
64 | N | H | -1.7185 | |
65 | T | H | -0.9641 | |
66 | H | H | -0.9776 | |
67 | Y | H | -1.1131 | |
68 | N | H | 0.0000 | |
69 | E | H | -3.7020 | |
70 | K | H | -3.3446 | |
71 | F | H | 0.0000 | |
72 | K | H | -3.7513 | |
74 | D | H | -3.3002 | |
75 | K | H | -2.2951 | |
76 | A | H | 0.0000 | |
77 | T | H | -0.9402 | |
78 | L | H | 0.0000 | |
79 | T | H | -0.3498 | |
80 | V | H | -0.1065 | |
81 | D | H | -0.5306 | |
82 | T | H | -0.4356 | |
83 | S | H | -0.3946 | |
84 | S | H | -0.4884 | |
85 | T | H | -0.4788 | |
86 | T | H | 0.0000 | |
87 | A | H | 0.0000 | |
88 | Y | H | -0.3441 | |
89 | V | H | 0.0000 | |
90 | D | H | -1.0207 | |
91 | L | H | 0.0000 | |
92 | S | H | -1.0226 | |
93 | S | H | -1.0035 | |
94 | L | H | 0.0000 | |
95 | T | H | -1.2984 | |
96 | S | H | -1.4150 | |
97 | E | H | -2.0092 | |
98 | D | H | 0.0000 | |
99 | S | H | -0.5627 | |
100 | A | H | 0.0000 | |
101 | V | H | -0.0070 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | -0.3277 | |
107 | T | H | -0.3029 | |
108 | G | H | -0.5174 | |
109 | H | H | -0.8517 | |
114 | Y | H | -0.1889 | |
115 | F | H | 0.0000 | |
116 | D | H | -0.2339 | |
117 | Y | H | -0.0515 | |
118 | W | H | -0.4592 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.8041 | |
121 | G | H | 0.0000 | |
122 | T | H | 0.0000 | |
123 | T | H | 0.0289 | |
124 | L | H | 0.0000 | |
125 | T | H | 0.0715 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.6723 | |
128 | S | H | -0.8368 | |
1 | E | L | -2.2503 | |
2 | I | L | 0.0000 | |
3 | Q | L | -2.1936 | |
4 | M | L | 0.0000 | |
5 | T | L | -1.2499 | |
6 | Q | L | 0.0000 | |
7 | T | L | -0.5420 | |
8 | T | L | -0.4649 | |
9 | S | L | -0.7851 | |
10 | S | L | -1.0649 | |
11 | L | L | -0.5859 | |
12 | S | L | -0.8254 | |
13 | A | L | 0.0000 | |
14 | S | L | -0.7048 | |
15 | L | L | -0.0172 | |
16 | G | L | -1.3761 | |
17 | D | L | -1.9837 | |
18 | R | L | -2.5363 | |
19 | V | L | 0.0000 | |
20 | T | L | -0.5360 | |
21 | I | L | 0.0000 | |
22 | S | L | -0.8286 | |
23 | C | L | 0.0000 | |
24 | R | L | -2.9290 | |
25 | A | L | 0.0000 | |
26 | S | L | -2.2505 | |
27 | Q | L | -2.7541 | |
28 | D | L | -2.8418 | |
29 | I | L | 0.0000 | |
36 | S | L | -0.9320 | |
37 | N | L | -0.5904 | |
38 | Y | L | 0.0857 | |
39 | L | L | 0.0000 | |
40 | N | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | 0.0000 | |
45 | K | L | -1.2752 | |
46 | P | L | -1.3667 | |
47 | D | L | -2.1665 | |
48 | G | L | -1.3566 | |
49 | T | L | -1.1022 | |
50 | V | L | -0.5902 | |
51 | K | L | -0.5183 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | -0.1044 | |
56 | Y | L | 0.0175 | |
57 | T | L | 0.0000 | |
65 | S | L | -0.8163 | |
66 | R | L | -1.3837 | |
67 | L | L | -0.3653 | |
68 | H | L | -0.5292 | |
69 | S | L | -0.5172 | |
70 | G | L | -0.4749 | |
71 | V | L | -0.1962 | |
72 | P | L | -0.2610 | |
74 | S | L | -0.3319 | |
75 | R | L | -1.1078 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.5831 | |
78 | G | L | 0.0000 | |
79 | S | L | -0.8230 | |
80 | G | L | -1.0551 | |
83 | S | L | -1.2485 | |
84 | G | L | -1.7642 | |
85 | T | L | -2.3056 | |
86 | D | L | -2.3446 | |
87 | Y | L | 0.0000 | |
88 | S | L | -0.7865 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.7671 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.9134 | |
93 | N | L | -2.4325 | |
94 | L | L | 0.0000 | |
95 | E | L | -2.2060 | |
96 | Q | L | -1.8043 | |
97 | E | L | -1.8364 | |
98 | D | L | 0.0000 | |
99 | I | L | -0.7538 | |
100 | A | L | 0.0000 | |
101 | T | L | -0.9467 | |
102 | Y | L | 0.0000 | |
103 | F | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | G | L | 0.0587 | |
108 | D | L | -0.4132 | |
109 | T | L | 0.0165 | |
114 | L | L | 0.5106 | |
115 | P | L | -0.3914 | |
116 | F | L | 0.0590 | |
117 | T | L | -0.4926 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | S | L | -0.9445 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | K | L | -1.9625 | |
124 | L | L | 0.0000 | |
125 | E | L | -1.1973 | |
126 | V | L | 0.2286 | |
127 | K | L | -1.1105 |