Chain sequence(s) |
A: MTPLGPASSLPQSFLLKCLEQVRKIQGDGAALQEKLCATYKLCHPEELVLLGHSLGIPWAPLSSCPSQALQLAGCLSQLHSGLFLYQGLLQALEGISPELGPTLDTLQLDVADFATTIWQQMEELGMAPALQPTQGAMPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRHLAQP
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:01:03) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:01:03) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:01:03) [INFO] runJob: Creating pdb object from: input.pdb (00:01:03) [INFO] FoldX: Starting FoldX energy minimalization (00:01:03) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:27) [CRITICAL] pyMol: Pymol encountered an error: /bin/sh: pymol: command not found Movie creation failed. (00:02:27) [INFO] Main: Simulation completed successfully. (00:02:28) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | M | A | 1.0995 | |
2 | T | A | 0.5214 | |
3 | P | A | 0.5926 | |
4 | L | A | 1.2907 | |
5 | G | A | 0.3166 | |
6 | P | A | 0.0376 | |
7 | A | A | 0.0633 | |
8 | S | A | -0.3584 | |
9 | S | A | -0.0785 | |
10 | L | A | 0.0000 | |
11 | P | A | -0.6051 | |
12 | Q | A | -1.4881 | |
13 | S | A | -0.8745 | |
14 | F | A | 0.0000 | |
15 | L | A | 0.0000 | |
16 | L | A | -0.8081 | |
17 | K | A | -1.5953 | |
18 | C | A | 0.0000 | |
19 | L | A | 0.0000 | |
20 | E | A | -2.4556 | |
21 | Q | A | -2.3541 | |
22 | V | A | 0.0000 | |
23 | R | A | -2.9950 | |
24 | K | A | -3.0704 | |
25 | I | A | 0.0000 | |
26 | Q | A | -2.0003 | |
27 | G | A | -1.6616 | |
28 | D | A | -1.6573 | |
29 | G | A | -1.2896 | |
30 | A | A | -1.2569 | |
31 | A | A | -1.1684 | |
32 | L | A | 0.0000 | |
33 | Q | A | -1.5287 | |
34 | E | A | -2.4013 | |
35 | K | A | -2.0815 | |
36 | L | A | 0.0000 | |
37 | C | A | -1.3936 | |
38 | A | A | -1.0542 | |
39 | T | A | -1.0304 | |
40 | Y | A | -0.6234 | |
41 | K | A | -1.7220 | |
42 | L | A | -1.2441 | |
43 | C | A | -1.4713 | |
44 | H | A | -1.9915 | |
45 | P | A | -1.3480 | |
46 | E | A | -2.1644 | |
47 | E | A | -2.1167 | |
48 | L | A | 0.0000 | |
49 | V | A | 1.0554 | |
50 | L | A | 1.6205 | |
51 | L | A | 0.8218 | |
52 | G | A | 0.5521 | |
53 | H | A | -0.4367 | |
54 | S | A | -0.0898 | |
55 | L | A | -0.1677 | |
56 | G | A | -0.5150 | |
57 | I | A | 0.0000 | |
58 | P | A | 0.3097 | |
59 | W | A | 1.0359 | |
60 | A | A | 0.0000 | |
61 | P | A | 0.1871 | |
62 | L | A | 0.0090 | |
63 | S | A | -0.3510 | |
64 | S | A | -0.4692 | |
65 | C | A | 0.0000 | |
66 | P | A | -0.7459 | |
67 | S | A | -0.7683 | |
68 | Q | A | -0.8301 | |
69 | A | A | -0.3492 | |
70 | L | A | 0.1774 | |
71 | Q | A | -0.9799 | |
72 | L | A | 0.0000 | |
73 | A | A | -0.3550 | |
74 | G | A | -0.5969 | |
75 | C | A | 0.0000 | |
76 | L | A | 0.0000 | |
77 | S | A | -0.2536 | |
78 | Q | A | -0.3726 | |
79 | L | A | 0.0000 | |
80 | H | A | 0.0000 | |
81 | S | A | -0.4402 | |
82 | G | A | 0.0000 | |
83 | L | A | 0.0000 | |
84 | F | A | -0.2498 | |
85 | L | A | -0.0687 | |
86 | Y | A | 0.0000 | |
87 | Q | A | -0.6775 | |
88 | G | A | -0.6919 | |
89 | L | A | 0.0000 | |
90 | L | A | 0.0000 | |
91 | Q | A | -1.8170 | |
92 | A | A | -1.2608 | |
93 | L | A | 0.0000 | |
94 | E | A | -2.4333 | |
95 | G | A | -1.9843 | |
96 | I | A | 0.0000 | |
97 | S | A | -1.2979 | |
98 | P | A | -1.2629 | |
99 | E | A | -2.1666 | |
100 | L | A | 0.0000 | |
101 | G | A | -1.4524 | |
102 | P | A | -1.1020 | |
103 | T | A | -1.0502 | |
104 | L | A | 0.0000 | |
105 | D | A | -1.2392 | |
106 | T | A | -0.3498 | |
107 | L | A | 0.0000 | |
108 | Q | A | -0.6412 | |
109 | L | A | 0.2909 | |
110 | D | A | -0.9547 | |
111 | V | A | 0.0000 | |
112 | A | A | -0.5425 | |
113 | D | A | -1.5850 | |
114 | F | A | 0.0000 | |
115 | A | A | 0.0000 | |
116 | T | A | -1.0061 | |
117 | T | A | -1.0462 | |
118 | I | A | 0.0000 | |
119 | W | A | -1.4926 | |
120 | Q | A | -2.2218 | |
121 | Q | A | 0.0000 | |
122 | M | A | 0.0000 | |
123 | E | A | -3.0089 | |
124 | E | A | -2.7818 | |
125 | L | A | -1.1157 | |
126 | G | A | -1.4259 | |
127 | M | A | -0.8915 | |
128 | A | A | -1.0306 | |
129 | P | A | -0.1147 | |
130 | A | A | 0.4685 | |
131 | L | A | 0.9312 | |
132 | Q | A | -0.6791 | |
133 | P | A | -0.6500 | |
134 | T | A | -0.7211 | |
135 | Q | A | -1.3961 | |
136 | G | A | -0.4535 | |
137 | A | A | -0.1900 | |
138 | M | A | -0.0621 | |
139 | P | A | 0.0518 | |
140 | A | A | 0.0100 | |
141 | F | A | 0.0000 | |
142 | A | A | 0.1007 | |
143 | S | A | 0.1205 | |
144 | A | A | 0.2754 | |
145 | F | A | 0.8565 | |
146 | Q | A | 0.0522 | |
147 | R | A | -0.7162 | |
148 | R | A | -0.2438 | |
149 | A | A | 0.0000 | |
150 | G | A | 0.0000 | |
151 | G | A | 0.0000 | |
152 | V | A | 0.0000 | |
153 | L | A | 0.0000 | |
154 | V | A | 0.0000 | |
155 | A | A | 0.0000 | |
156 | S | A | -0.5304 | |
157 | H | A | -0.2972 | |
158 | L | A | 0.0000 | |
159 | Q | A | -0.8058 | |
160 | S | A | -0.4861 | |
161 | F | A | 0.0000 | |
162 | L | A | 0.0000 | |
163 | E | A | -1.2847 | |
164 | V | A | -0.2302 | |
165 | S | A | 0.0000 | |
166 | Y | A | -1.6356 | |
167 | R | A | -2.4198 | |
168 | V | A | 0.0000 | |
169 | L | A | 0.0000 | |
170 | R | A | -2.5453 | |
171 | H | A | -2.5142 | |
172 | L | A | -1.5328 | |
173 | A | A | 0.0000 | |
174 | Q | A | -1.9935 | |
175 | P | A | -0.6881 |