Chain sequence(s) |
A: MADEKPKEGVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGVY
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:04) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:04) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:04) [INFO] runJob: Creating pdb object from: input.pdb (00:00:04) [INFO] FoldX: Starting FoldX energy minimalization (00:00:04) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:37) [INFO] Movie: Creting movie with webm format (00:03:29) [INFO] Main: Simulation completed successfully. (00:03:34) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | M | A | 0.6498 | |
2 | A | A | -0.8595 | |
3 | D | A | -2.8157 | |
4 | E | A | -3.7672 | |
5 | K | A | -3.7929 | |
6 | P | A | -3.1514 | |
7 | K | A | -3.6959 | |
8 | E | A | -3.1191 | |
9 | G | A | -1.7096 | |
10 | V | A | -0.1565 | |
11 | K | A | -1.4913 | |
12 | T | A | -1.8725 | |
13 | E | A | -3.3038 | |
14 | N | A | -3.7752 | |
15 | N | A | -3.6808 | |
16 | D | A | -3.3896 | |
17 | H | A | -3.5241 | |
18 | I | A | 0.0000 | |
19 | N | A | -4.0170 | |
20 | L | A | 0.0000 | |
21 | K | A | -1.2455 | |
22 | V | A | 0.3860 | |
23 | A | A | 0.5210 | |
24 | G | A | 0.0000 | |
25 | Q | A | -0.3407 | |
26 | D | A | 0.0912 | |
27 | G | A | 0.8304 | |
28 | S | A | 1.2033 | |
29 | V | A | 1.4610 | |
30 | V | A | 0.8326 | |
31 | Q | A | -1.1386 | |
32 | F | A | -1.0491 | |
33 | K | A | -2.6430 | |
34 | I | A | -2.3798 | |
35 | K | A | -3.7438 | |
36 | R | A | -3.9650 | |
37 | H | A | -2.7640 | |
38 | T | A | -1.7075 | |
39 | P | A | -1.4623 | |
40 | L | A | -1.3933 | |
41 | S | A | -1.7814 | |
42 | K | A | -2.4423 | |
43 | L | A | -0.9977 | |
44 | M | A | -1.3420 | |
45 | K | A | -2.6937 | |
46 | A | A | -2.1090 | |
47 | Y | A | -1.7025 | |
48 | C | A | -2.1106 | |
49 | E | A | -3.1827 | |
50 | R | A | -3.4267 | |
51 | Q | A | -2.4309 | |
52 | G | A | -1.8554 | |
53 | L | A | -0.5794 | |
54 | S | A | 0.0000 | |
55 | M | A | -0.9325 | |
56 | R | A | -2.0832 | |
57 | Q | A | -1.8186 | |
58 | I | A | 0.0000 | |
59 | R | A | -2.3419 | |
60 | F | A | 0.0000 | |
61 | R | A | -1.6298 | |
62 | F | A | -1.3138 | |
63 | D | A | -2.2067 | |
64 | G | A | -1.8435 | |
65 | Q | A | -1.9245 | |
66 | P | A | -1.7693 | |
67 | I | A | 0.0000 | |
68 | N | A | -2.7038 | |
69 | E | A | -2.7966 | |
70 | T | A | -1.5514 | |
71 | D | A | -1.6486 | |
72 | T | A | -1.8237 | |
73 | P | A | 0.0000 | |
74 | A | A | -2.1661 | |
75 | Q | A | -1.9718 | |
76 | L | A | -1.6465 | |
77 | E | A | -2.9983 | |
78 | M | A | 0.0000 | |
79 | E | A | -4.7147 | |
80 | D | A | -4.2807 | |
81 | E | A | -4.1774 | |
82 | D | A | -2.9593 | |
83 | T | A | -1.4561 | |
84 | I | A | 0.0000 | |
85 | D | A | -0.5722 | |
86 | V | A | 0.0000 | |
87 | F | A | 0.1937 | |
88 | Q | A | -0.5948 | |
89 | Q | A | -1.0541 | |
90 | Q | A | -1.2435 | |
91 | T | A | -0.5924 | |
92 | G | A | -0.4598 | |
93 | G | A | 0.2421 | |
94 | V | A | 1.8219 | |
95 | Y | A | 1.6326 |