Project name: MN2

Status: done

Started: 2024-04-24 10:39:46
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Chain sequence(s) X: KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
input PDB
Selected Chain(s) X
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with X chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:04)
Show buried residues

Minimal score value
-2.1628
Maximal score value
1.7747
Average score
-0.4672
Total score value
-60.2687

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K X -1.3803
2 V X 1.4208
3 F X 0.0000
4 G X -0.4860
5 R X -0.8592
6 C X -0.1652
7 E X -1.3378
8 L X 0.0000
9 A X 0.0000
10 A X 0.0107
11 A X -0.1822
12 M X 0.0000
13 K X -1.2634
14 R X -2.0489
15 H X -0.6508
16 G X -0.4450
17 L X 0.0000
18 D X -1.1219
19 N X -1.4382
20 Y X -0.2995
21 R X -1.8852
22 G X -0.9183
23 Y X -0.0653
24 S X -0.3385
25 L X 0.0000
26 G X 0.0000
27 N X -0.1519
28 W X 0.0000
29 V X 0.0000
30 C X 0.0000
31 A X 0.0000
32 A X 0.0000
33 K X -0.3707
34 F X 1.1695
35 E X -0.0765
36 S X -0.3029
37 N X -1.3356
38 F X 0.0000
39 N X -0.0953
40 T X 0.0000
41 Q X -1.1603
42 A X -0.2163
43 T X -0.2543
44 N X -1.6219
45 R X -2.1440
46 N X -0.7030
47 T X -0.4598
48 D X -1.8210
49 G X -0.4328
50 S X 0.0000
51 T X 0.0000
52 D X -0.3123
53 Y X 0.0732
54 G X 0.0000
55 I X 0.0000
56 L X 0.0000
57 Q X 0.0000
58 I X 0.0000
59 N X -0.3647
60 S X 0.0000
61 R X -0.5057
62 W X 0.6588
63 W X 0.0000
64 C X 0.0000
65 N X -1.3703
66 D X -0.7040
67 G X -0.8571
68 R X -1.8895
69 T X -0.3739
70 P X -0.3421
71 G X -0.5233
72 S X -0.5533
73 R X -1.9255
74 N X -1.5007
75 L X 0.3167
76 C X -0.0193
77 N X -1.1810
78 I X 0.1286
79 P X -0.3219
80 C X 0.0000
81 S X -0.2106
82 A X -0.0283
83 L X 0.0000
84 L X 0.1231
85 S X -0.2613
86 S X -0.5695
87 D X -1.8389
88 I X 0.0000
89 T X -0.0332
90 A X 0.0048
91 S X 0.0000
92 V X 0.0000
93 N X -1.2730
94 C X 0.0000
95 A X 0.0000
96 K X -0.6083
97 K X -1.4654
98 I X 0.0000
99 V X 0.0000
100 S X -0.4638
101 D X -1.8988
102 G X -1.0186
103 N X -1.3707
104 G X -0.2917
105 M X 0.0000
106 N X -0.4251
107 A X -0.0472
108 W X 0.0000
109 V X 1.7747
110 A X 0.3392
111 W X 0.0000
112 R X -2.1628
113 N X -1.9295
114 R X -2.0756
115 C X 0.0000
116 K X -1.6804
117 G X -0.7350
118 T X -0.4662
119 D X -1.7696
120 V X -0.3789
121 Q X -1.1620
122 A X -0.3457
123 W X 0.2722
124 I X 0.0293
125 R X -1.8683
126 G X -0.7870
127 C X -0.3131
128 R X -1.5411
129 L X 1.2059
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Laboratory of Theory of Biopolymers 2018