| Chain sequence(s) |
A: STATAQAMMAKRHATLYGDPAGQSQASRIIDDVKPGMRYVVNVDSGETVAFRRAGEKIVAWTFAQMVRDTSVDLGLLMPDLPGSAGVRVYIDRSDLF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:01:27)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:01:27)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:01:27)
[INFO] runJob: Creating pdb object from: input.pdb (00:01:27)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:27)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:43)
[CRITICAL] pyMol: Pymol encountered an error: /bin/sh: pymol: command not found Movie
creation failed. (00:03:43)
[INFO] Main: Simulation completed successfully. (00:03:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 13 | S | A | -0.3579 | |
| 14 | T | A | -0.3595 | |
| 15 | A | A | -0.2826 | |
| 16 | T | A | -0.1956 | |
| 17 | A | A | -0.6533 | |
| 18 | Q | A | -1.3359 | |
| 19 | A | A | -1.1675 | |
| 20 | M | A | -0.8070 | |
| 21 | A | A | -1.4303 | |
| 22 | K | A | -2.4621 | |
| 23 | R | A | -2.3747 | |
| 24 | H | A | -1.1586 | |
| 25 | A | A | 0.0000 | |
| 26 | T | A | -0.8555 | |
| 27 | L | A | 0.4660 | |
| 28 | Y | A | -0.0043 | |
| 29 | G | A | -0.8124 | |
| 30 | D | A | -1.7554 | |
| 31 | P | A | -1.2236 | |
| 32 | A | A | -1.1431 | |
| 33 | G | A | -1.2415 | |
| 34 | Q | A | -1.4553 | |
| 35 | S | A | -1.4011 | |
| 36 | Q | A | -1.8996 | |
| 37 | A | A | -1.2195 | |
| 38 | S | A | -0.9654 | |
| 39 | R | A | -0.8848 | |
| 40 | I | A | 0.2915 | |
| 41 | I | A | -0.1275 | |
| 42 | D | A | -1.4371 | |
| 43 | V | A | 0.0000 | |
| 44 | K | A | -2.5690 | |
| 45 | P | A | -1.7566 | |
| 46 | G | A | -1.3860 | |
| 47 | M | A | -1.5281 | |
| 48 | R | A | -1.8688 | |
| 49 | Y | A | -0.2061 | |
| 50 | V | A | -0.1824 | |
| 51 | N | A | -1.3128 | |
| 52 | V | A | 0.0000 | |
| 53 | D | A | -3.2236 | |
| 54 | S | A | -2.4087 | |
| 55 | G | A | -1.9283 | |
| 56 | E | A | -1.5578 | |
| 57 | T | A | -1.3037 | |
| 58 | V | A | 0.0000 | |
| 59 | A | A | 0.0000 | |
| 60 | F | A | 0.0000 | |
| 61 | R | A | -1.3474 | |
| 62 | A | A | -1.8773 | |
| 63 | G | A | -2.1265 | |
| 64 | E | A | -2.6326 | |
| 65 | K | A | -2.2354 | |
| 66 | I | A | -0.9582 | |
| 67 | V | A | -0.2592 | |
| 68 | A | A | 0.0000 | |
| 69 | W | A | 0.0000 | |
| 70 | T | A | -1.3602 | |
| 71 | F | A | 0.0000 | |
| 72 | A | A | -0.9567 | |
| 73 | Q | A | -1.4241 | |
| 74 | M | A | -1.0125 | |
| 75 | V | A | 0.2111 | |
| 76 | R | A | -2.3456 | |
| 77 | D | A | -2.3167 | |
| 78 | T | A | -0.9564 | |
| 79 | S | A | -0.6118 | |
| 80 | V | A | 0.0000 | |
| 81 | D | A | -0.7227 | |
| 82 | L | A | 0.0000 | |
| 83 | G | A | -0.5904 | |
| 84 | L | A | -0.7236 | |
| 85 | L | A | 0.0000 | |
| 86 | M | A | 0.0000 | |
| 87 | P | A | -1.3708 | |
| 88 | D | A | -1.9592 | |
| 89 | L | A | 0.0000 | |
| 90 | P | A | -1.4677 | |
| 91 | G | A | -1.3933 | |
| 92 | S | A | 0.0000 | |
| 93 | A | A | -0.8480 | |
| 94 | G | A | -0.9768 | |
| 95 | V | A | 0.0000 | |
| 96 | R | A | -1.3198 | |
| 97 | V | A | 0.0000 | |
| 98 | Y | A | -0.7602 | |
| 99 | I | A | 0.0000 | |
| 100 | D | A | -3.4672 | |
| 101 | R | A | -3.2742 | |
| 102 | S | A | 0.0000 | |
| 103 | D | A | -1.3471 | |
| 104 | L | A | 1.4122 | |
| 105 | F | A | 1.9382 |