Project name: 504e04101799464

Status: done

Started: 2021-02-27 13:13:52
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Chain sequence(s) A: STATAQAMMAKRHATLYGDPAGQSQASRIIDDVKPGMRYVVNVDSGETVAFRRAGEKIVAWTFAQMVRDTSVDLGLLMPDLPGSAGVRVYIDRSDLF
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:01:27)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:01:27)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:01:27)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:01:27)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:01:27)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:43)
[CRITICAL]   pyMol:    Pymol encountered an error: /bin/sh: pymol: command not found Movie         
                       creation failed.                                                            (00:03:43)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:46)
Show buried residues

Minimal score value
-3.4672
Maximal score value
1.9382
Average score
-0.9523
Total score value
-88.5656

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
13 S A -0.3579
14 T A -0.3595
15 A A -0.2826
16 T A -0.1956
17 A A -0.6533
18 Q A -1.3359
19 A A -1.1675
20 M A -0.8070
21 A A -1.4303
22 K A -2.4621
23 R A -2.3747
24 H A -1.1586
25 A A 0.0000
26 T A -0.8555
27 L A 0.4660
28 Y A -0.0043
29 G A -0.8124
30 D A -1.7554
31 P A -1.2236
32 A A -1.1431
33 G A -1.2415
34 Q A -1.4553
35 S A -1.4011
36 Q A -1.8996
37 A A -1.2195
38 S A -0.9654
39 R A -0.8848
40 I A 0.2915
41 I A -0.1275
42 D A -1.4371
43 V A 0.0000
44 K A -2.5690
45 P A -1.7566
46 G A -1.3860
47 M A -1.5281
48 R A -1.8688
49 Y A -0.2061
50 V A -0.1824
51 N A -1.3128
52 V A 0.0000
53 D A -3.2236
54 S A -2.4087
55 G A -1.9283
56 E A -1.5578
57 T A -1.3037
58 V A 0.0000
59 A A 0.0000
60 F A 0.0000
61 R A -1.3474
62 A A -1.8773
63 G A -2.1265
64 E A -2.6326
65 K A -2.2354
66 I A -0.9582
67 V A -0.2592
68 A A 0.0000
69 W A 0.0000
70 T A -1.3602
71 F A 0.0000
72 A A -0.9567
73 Q A -1.4241
74 M A -1.0125
75 V A 0.2111
76 R A -2.3456
77 D A -2.3167
78 T A -0.9564
79 S A -0.6118
80 V A 0.0000
81 D A -0.7227
82 L A 0.0000
83 G A -0.5904
84 L A -0.7236
85 L A 0.0000
86 M A 0.0000
87 P A -1.3708
88 D A -1.9592
89 L A 0.0000
90 P A -1.4677
91 G A -1.3933
92 S A 0.0000
93 A A -0.8480
94 G A -0.9768
95 V A 0.0000
96 R A -1.3198
97 V A 0.0000
98 Y A -0.7602
99 I A 0.0000
100 D A -3.4672
101 R A -3.2742
102 S A 0.0000
103 D A -1.3471
104 L A 1.4122
105 F A 1.9382
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Laboratory of Theory of Biopolymers 2018