Project name: BLAC25

Status: done

Started: 2023-09-27 09:03:47
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Chain sequence(s) A: LIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:05)
[CRITICAL]   pyMol:    Pymol encountered an error: /bin/sh: pymol: command not found Movie         
                       creation failed.                                                            (00:02:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:06)
Show buried residues

Minimal score value
-3.5284
Maximal score value
1.9231
Average score
-1.2184
Total score value
-196.1658

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 0.9493
2 I A 0.0000
3 V A 1.9231
4 T A 0.4849
5 Q A -0.2150
6 T A -0.4010
7 M A -1.0701
8 K A -2.0575
9 G A -1.2924
10 L A 0.0000
11 D A -1.3680
12 I A -1.4667
13 Q A -2.3798
14 K A -2.7255
15 V A 0.0000
16 A A -2.0033
17 G A -1.8487
18 T A -1.4020
19 W A 0.0000
20 Y A -1.1843
21 S A 0.0000
22 L A 0.0000
23 A A 0.0000
24 M A 0.0000
25 A A 0.0000
26 A A 0.0000
27 S A -1.2654
28 D A -1.5079
29 I A -0.6204
30 S A -1.0099
31 L A 0.0000
32 L A 0.0000
33 D A -1.9706
34 A A -1.4572
35 Q A -1.8736
36 S A -1.7052
37 A A -0.9627
38 P A -0.7238
39 L A 0.0000
40 R A -0.6281
41 V A -0.2721
42 Y A 0.0000
43 V A 0.0000
44 E A -1.6843
45 E A -2.3070
46 L A 0.0000
47 K A -2.7272
48 P A -2.0380
49 T A -1.5814
50 P A -1.6043
51 E A -2.3996
52 G A -2.0841
53 D A -2.5946
54 L A 0.0000
55 E A -1.8939
56 I A 0.0000
57 L A -1.8006
58 L A 0.0000
59 Q A 0.0000
60 K A -1.9372
61 W A -2.1981
62 E A -3.3365
63 N A -2.8953
64 G A -2.4745
65 E A -2.8528
66 C A -2.2957
67 A A -2.3067
68 Q A -2.3434
69 K A -2.4778
70 K A -2.1867
71 I A -0.8453
72 I A -1.0949
73 A A 0.0000
74 E A -2.4135
75 K A -2.1702
76 T A -1.6316
77 K A -1.9977
78 I A -1.2997
79 P A -1.3275
80 A A 0.0000
81 V A -0.8649
82 F A 0.0000
83 K A -1.7093
84 I A -1.5048
85 D A -1.9123
86 A A -0.7471
87 L A -0.0790
88 N A -1.5536
89 E A -2.3824
90 N A -1.7489
91 K A -1.5177
92 V A 0.0000
93 L A 0.0000
94 V A 0.0000
95 L A 0.0000
96 D A -0.8622
97 T A -0.9248
98 D A -1.4642
99 Y A -1.7433
100 K A -2.5796
101 K A -2.1816
102 Y A 0.0000
103 L A 0.0000
104 L A 0.0000
105 F A 0.0000
106 C A 0.0000
107 M A 0.0000
108 E A 0.0000
109 N A -1.8114
110 S A -1.5667
111 A A -1.1974
112 E A -1.6894
113 P A -1.3391
114 E A -2.2026
115 Q A -2.2108
116 S A -1.5844
117 L A 0.0000
118 A A 0.0000
119 C A 0.0000
120 Q A 0.0000
121 C A 0.0000
122 L A 0.0000
123 V A 0.0000
124 R A -2.7937
125 T A -1.4735
126 P A -1.4416
127 E A -1.5361
128 V A -0.4485
129 D A -1.8295
130 D A -3.1375
131 E A -3.3101
132 A A 0.0000
133 L A -2.0518
134 E A -3.4938
135 K A -3.0501
136 F A 0.0000
137 D A -2.5614
138 K A -3.0310
139 A A -1.9776
140 L A -1.8140
141 K A -2.3647
142 A A -0.9838
143 L A 0.0000
144 P A -0.5706
145 M A -1.0608
146 H A -1.2738
147 I A -1.2829
148 R A -1.7285
149 L A -0.8507
150 S A -0.5690
151 F A 0.0000
152 N A -1.7866
153 P A -1.6462
154 T A -1.8028
155 Q A -2.5225
156 L A 0.0000
157 E A -3.3677
158 E A -3.5284
159 Q A -2.8377
160 C A -1.8687
161 H A -1.9387
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Laboratory of Theory of Biopolymers 2018