Chain sequence(s) |
X: TDWNEIKGKVPVEVVQSPHSPNLYFVLLVPKVALEYHNLNNQVVKESLEVKATQSSFNPTQRLQKDSPVKDSSKQGEKLSETTASSMSSGMATSTRAKALKVEVERGSQSDSLLKNDFAKKPLKHKNSSGEVKLEAEKEFTEAWKPLLTTDQIAREKGMGATVVSFYDAPYSENHTAFGLVDHIDPKKMVENYPPSWKT
input PDB |
Selected Chain(s) | X |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with X chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:56) [CRITICAL] pyMol: Pymol encountered an error: /bin/sh: pymol: command not found Movie creation failed. (00:04:56) [INFO] Main: Simulation completed successfully. (00:04:59) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | T | X | -0.1647 | |
2 | D | X | -1.5389 | |
3 | W | X | -0.7851 | |
4 | N | X | -2.1625 | |
5 | E | X | -2.4944 | |
6 | I | X | 0.0000 | |
7 | K | X | -2.4043 | |
8 | G | X | -1.8771 | |
9 | K | X | 0.0000 | |
10 | V | X | 0.1125 | |
11 | P | X | 0.4817 | |
12 | V | X | 1.1943 | |
13 | E | X | 0.4726 | |
14 | V | X | 2.1122 | |
15 | V | X | 1.9134 | |
16 | Q | X | 0.0632 | |
17 | S | X | -0.6219 | |
18 | P | X | -0.9353 | |
19 | H | X | -1.4359 | |
20 | S | X | -1.0428 | |
21 | P | X | -0.9757 | |
22 | N | X | -1.0602 | |
23 | L | X | 0.0486 | |
24 | Y | X | 1.0824 | |
25 | F | X | 1.8927 | |
26 | V | X | 0.0000 | |
27 | L | X | 1.1365 | |
28 | L | X | 0.0000 | |
29 | V | X | 0.5409 | |
30 | P | X | -0.3264 | |
31 | K | X | -0.7317 | |
32 | V | X | 0.6253 | |
33 | A | X | 0.4636 | |
34 | L | X | 0.5938 | |
35 | E | X | -0.6234 | |
36 | Y | X | -0.0364 | |
37 | H | X | -1.4826 | |
38 | N | X | -1.7351 | |
39 | L | X | -1.2170 | |
40 | N | X | -2.2485 | |
41 | N | X | -2.8985 | |
42 | Q | X | -2.3364 | |
43 | V | X | -0.9337 | |
44 | V | X | -1.5875 | |
45 | K | X | -2.7003 | |
46 | E | X | -2.3661 | |
47 | S | X | -0.9095 | |
48 | L | X | 0.0884 | |
49 | E | X | -1.1428 | |
50 | V | X | 0.6847 | |
51 | K | X | -0.5775 | |
52 | A | X | -0.2105 | |
53 | T | X | -0.6540 | |
54 | Q | X | -1.3372 | |
55 | S | X | -0.9423 | |
56 | S | X | -0.5658 | |
57 | F | X | -0.2286 | |
58 | N | X | -1.5118 | |
59 | P | X | -1.2231 | |
60 | T | X | -1.0509 | |
61 | Q | X | -1.7699 | |
62 | R | X | -1.1345 | |
63 | L | X | 0.0484 | |
64 | Q | X | -1.0380 | |
65 | K | X | -2.3051 | |
66 | D | X | -2.2372 | |
67 | S | X | -1.6460 | |
68 | P | X | -1.9081 | |
69 | V | X | -1.2657 | |
70 | K | X | -2.4000 | |
71 | D | X | -2.2323 | |
72 | S | X | -1.4929 | |
73 | S | X | -1.2733 | |
74 | K | X | -2.7786 | |
75 | Q | X | -2.9626 | |
76 | G | X | -2.3299 | |
77 | E | X | -2.7341 | |
78 | K | X | -2.9156 | |
79 | L | X | -1.1455 | |
80 | S | X | -1.2060 | |
81 | E | X | -1.6125 | |
82 | T | X | -0.7455 | |
83 | T | X | -0.5499 | |
84 | A | X | -0.3627 | |
85 | S | X | -0.2196 | |
86 | S | X | 0.0766 | |
87 | M | X | 0.8583 | |
88 | S | X | 0.1630 | |
89 | S | X | 0.1310 | |
90 | G | X | 0.3836 | |
91 | M | X | 1.0747 | |
92 | A | X | 0.5186 | |
93 | T | X | -0.1088 | |
94 | S | X | -0.9284 | |
95 | T | X | -1.1657 | |
96 | R | X | -2.0564 | |
97 | A | X | -1.3069 | |
98 | K | X | -1.3063 | |
99 | A | X | -0.3167 | |
100 | L | X | 0.1889 | |
101 | K | X | -0.2097 | |
102 | V | X | 0.3666 | |
103 | E | X | -0.5746 | |
104 | V | X | -0.4182 | |
105 | E | X | -1.7168 | |
106 | R | X | -2.0263 | |
107 | G | X | -1.1016 | |
108 | S | X | -1.3019 | |
109 | Q | X | -1.8772 | |
110 | S | X | -1.8285 | |
111 | D | X | -2.1683 | |
112 | S | X | -1.3709 | |
113 | L | X | -0.4664 | |
114 | L | X | 0.1028 | |
115 | K | X | -0.9954 | |
116 | N | X | -0.5773 | |
117 | D | X | -0.6259 | |
118 | F | X | 1.0200 | |
119 | A | X | -0.2989 | |
120 | K | X | -2.3231 | |
121 | K | X | -3.0897 | |
122 | P | X | -2.9031 | |
123 | L | X | -2.3312 | |
124 | K | X | -2.7791 | |
125 | H | X | -2.7569 | |
126 | K | X | -3.0735 | |
127 | N | X | -2.9600 | |
128 | S | X | -1.6918 | |
129 | S | X | -1.1511 | |
130 | G | X | -1.9686 | |
131 | E | X | -3.1241 | |
132 | V | X | -2.5962 | |
133 | K | X | -2.0194 | |
134 | L | X | -0.0728 | |
135 | E | X | -1.4653 | |
136 | A | X | -1.3155 | |
137 | E | X | -2.6661 | |
138 | K | X | -2.4893 | |
139 | E | X | 0.0000 | |
140 | F | X | -0.8296 | |
141 | T | X | -1.2500 | |
142 | E | X | -2.3375 | |
143 | A | X | -1.4283 | |
144 | W | X | -1.0493 | |
145 | K | X | -1.8219 | |
146 | P | X | -0.5037 | |
147 | L | X | 0.5264 | |
148 | L | X | 0.1291 | |
149 | T | X | -0.7250 | |
150 | T | X | -1.2232 | |
151 | D | X | -2.3078 | |
152 | Q | X | -2.0184 | |
153 | I | X | -1.6353 | |
154 | A | X | -2.3761 | |
155 | R | X | -3.3841 | |
156 | E | X | -3.2729 | |
157 | K | X | -2.1441 | |
158 | G | X | -2.0737 | |
159 | M | X | -0.8150 | |
160 | G | X | -0.5286 | |
161 | A | X | 0.1841 | |
162 | T | X | 0.0000 | |
163 | V | X | 0.5523 | |
164 | V | X | 0.0000 | |
165 | S | X | 1.6049 | |
166 | F | X | 1.4619 | |
167 | Y | X | 0.5202 | |
168 | D | X | -0.6187 | |
169 | A | X | -0.9481 | |
170 | P | X | -0.7430 | |
171 | Y | X | 0.2610 | |
172 | S | X | -1.2632 | |
173 | E | X | -2.5532 | |
174 | N | X | -2.6271 | |
175 | H | X | -2.1757 | |
176 | T | X | -0.9224 | |
177 | A | X | 0.5717 | |
178 | F | X | 2.1187 | |
179 | G | X | 1.4709 | |
180 | L | X | 1.6139 | |
181 | V | X | 0.5459 | |
182 | D | X | -1.1179 | |
183 | H | X | -0.5899 | |
184 | I | X | -0.0278 | |
185 | D | X | -1.4073 | |
186 | P | X | -1.4338 | |
187 | K | X | -2.3810 | |
188 | K | X | -2.4531 | |
189 | M | X | -1.1335 | |
190 | V | X | -1.4263 | |
191 | E | X | -2.7155 | |
192 | N | X | -2.1774 | |
193 | Y | X | -0.8498 | |
194 | P | X | -0.5828 | |
195 | P | X | -0.7812 | |
196 | S | X | -0.2622 | |
197 | W | X | 0.2617 | |
198 | K | X | -1.1889 | |
199 | T | X | -0.6939 |