| Chain sequence(s) |
A: CGGRIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMNY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:18)
[CRITICAL] pyMol: Pymol encountered an error: /bin/sh: pymol: command not found Movie
creation failed. (00:01:18)
[INFO] Main: Simulation completed successfully. (00:01:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 273 | C | A | 0.3515 | |
| 274 | G | A | -0.5334 | |
| 275 | G | A | -1.0085 | |
| 276 | R | A | -1.9771 | |
| 277 | I | A | -0.9412 | |
| 278 | A | A | -1.8105 | |
| 279 | R | A | -3.4000 | |
| 280 | L | A | -2.0672 | |
| 281 | E | A | -3.3454 | |
| 282 | E | A | -3.9433 | |
| 283 | K | A | -3.0217 | |
| 284 | V | A | -1.8220 | |
| 285 | K | A | -3.4407 | |
| 286 | T | A | -2.2467 | |
| 287 | L | A | -1.8203 | |
| 288 | K | A | -2.9990 | |
| 289 | A | A | -2.3027 | |
| 290 | Q | A | -2.6427 | |
| 291 | N | A | -2.6644 | |
| 292 | S | A | -1.9888 | |
| 293 | E | A | -2.3883 | |
| 294 | L | A | -0.2426 | |
| 295 | A | A | -0.7839 | |
| 296 | S | A | -0.8854 | |
| 297 | T | A | -0.0207 | |
| 298 | A | A | -0.5304 | |
| 299 | N | A | -1.4771 | |
| 300 | M | A | 0.0002 | |
| 301 | L | A | 0.1900 | |
| 302 | R | A | -2.2443 | |
| 303 | E | A | -2.6545 | |
| 304 | Q | A | -1.5254 | |
| 305 | V | A | -1.0033 | |
| 306 | A | A | -1.7757 | |
| 307 | Q | A | -2.4013 | |
| 308 | L | A | -0.9584 | |
| 309 | K | A | -2.0750 | |
| 310 | Q | A | -1.9510 | |
| 311 | K | A | -1.6540 | |
| 312 | V | A | 0.4490 | |
| 313 | M | A | 0.3865 | |
| 314 | N | A | -0.3082 | |
| 315 | Y | A | 1.2724 |