Chain sequence(s) |
A: CGGRIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMNY
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:18) [CRITICAL] pyMol: Pymol encountered an error: /bin/sh: pymol: command not found Movie creation failed. (00:01:18) [INFO] Main: Simulation completed successfully. (00:01:18) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
273 | C | A | 0.3515 | |
274 | G | A | -0.5334 | |
275 | G | A | -1.0085 | |
276 | R | A | -1.9771 | |
277 | I | A | -0.9412 | |
278 | A | A | -1.8105 | |
279 | R | A | -3.4000 | |
280 | L | A | -2.0672 | |
281 | E | A | -3.3454 | |
282 | E | A | -3.9433 | |
283 | K | A | -3.0217 | |
284 | V | A | -1.8220 | |
285 | K | A | -3.4407 | |
286 | T | A | -2.2467 | |
287 | L | A | -1.8203 | |
288 | K | A | -2.9990 | |
289 | A | A | -2.3027 | |
290 | Q | A | -2.6427 | |
291 | N | A | -2.6644 | |
292 | S | A | -1.9888 | |
293 | E | A | -2.3883 | |
294 | L | A | -0.2426 | |
295 | A | A | -0.7839 | |
296 | S | A | -0.8854 | |
297 | T | A | -0.0207 | |
298 | A | A | -0.5304 | |
299 | N | A | -1.4771 | |
300 | M | A | 0.0002 | |
301 | L | A | 0.1900 | |
302 | R | A | -2.2443 | |
303 | E | A | -2.6545 | |
304 | Q | A | -1.5254 | |
305 | V | A | -1.0033 | |
306 | A | A | -1.7757 | |
307 | Q | A | -2.4013 | |
308 | L | A | -0.9584 | |
309 | K | A | -2.0750 | |
310 | Q | A | -1.9510 | |
311 | K | A | -1.6540 | |
312 | V | A | 0.4490 | |
313 | M | A | 0.3865 | |
314 | N | A | -0.3082 | |
315 | Y | A | 1.2724 |