Chain sequence(s) |
A: KVFERCELARTLKRLGMDGYRGIALANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:25) [INFO] Movie: Creting movie with webm format (00:04:29) [INFO] Main: Simulation completed successfully. (00:04:32) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | K | A | -2.5170 | |
2 | V | A | -0.3300 | |
3 | F | A | 0.0000 | |
4 | E | A | -2.1175 | |
5 | R | A | -1.7738 | |
6 | C | A | -1.3182 | |
7 | E | A | -1.6728 | |
8 | L | A | 0.0000 | |
9 | A | A | 0.0000 | |
10 | R | A | -1.6269 | |
11 | T | A | -1.4364 | |
12 | L | A | 0.0000 | |
13 | K | A | -2.2621 | |
14 | R | A | -2.4311 | |
15 | L | A | -1.1267 | |
16 | G | A | -1.4875 | |
17 | M | A | 0.0000 | |
18 | D | A | -2.0764 | |
19 | G | A | -1.7837 | |
20 | Y | A | -1.7689 | |
21 | R | A | -2.6364 | |
22 | G | A | -1.6214 | |
23 | I | A | 0.0000 | |
24 | A | A | -0.9657 | |
25 | L | A | 0.0000 | |
26 | A | A | -1.0442 | |
27 | N | A | -1.0923 | |
28 | W | A | 0.0000 | |
29 | M | A | 0.0000 | |
30 | C | A | 0.0000 | |
31 | L | A | 0.0000 | |
32 | A | A | 0.0000 | |
33 | K | A | -1.1674 | |
34 | W | A | -0.4861 | |
35 | E | A | -0.4115 | |
36 | S | A | -0.7768 | |
37 | G | A | -0.7181 | |
38 | Y | A | 0.0000 | |
39 | N | A | -1.4712 | |
40 | T | A | 0.0000 | |
41 | R | A | -2.5958 | |
42 | A | A | -1.3843 | |
43 | T | A | -0.9670 | |
44 | N | A | -0.8171 | |
45 | Y | A | -0.2088 | |
46 | N | A | -1.2907 | |
47 | A | A | -1.2273 | |
48 | G | A | -1.6058 | |
49 | D | A | -2.5102 | |
50 | R | A | -2.8507 | |
51 | S | A | 0.0000 | |
52 | T | A | -1.0490 | |
53 | D | A | -0.5766 | |
54 | Y | A | -0.5727 | |
55 | G | A | 0.0000 | |
56 | I | A | 0.0000 | |
57 | F | A | 0.0000 | |
58 | Q | A | 0.0000 | |
59 | I | A | 0.0000 | |
60 | N | A | -0.3175 | |
61 | S | A | 0.0000 | |
62 | R | A | -0.3975 | |
63 | Y | A | 1.4784 | |
64 | W | A | 0.3115 | |
65 | C | A | 0.0000 | |
66 | N | A | -1.6575 | |
67 | D | A | -1.7074 | |
68 | G | A | -1.8506 | |
69 | K | A | -2.6679 | |
70 | T | A | -1.8964 | |
71 | P | A | -1.3031 | |
72 | G | A | -0.2592 | |
73 | A | A | 0.1898 | |
74 | V | A | 1.4305 | |
75 | N | A | 0.0578 | |
76 | A | A | 0.0880 | |
77 | C | A | -0.5455 | |
78 | H | A | -0.9419 | |
79 | L | A | -0.8698 | |
80 | S | A | -0.9516 | |
81 | C | A | 0.0000 | |
82 | S | A | -0.8173 | |
83 | A | A | -1.0901 | |
84 | L | A | 0.0000 | |
85 | L | A | -2.0985 | |
86 | Q | A | -3.2399 | |
87 | D | A | -3.6050 | |
88 | N | A | -2.9169 | |
89 | I | A | 0.0000 | |
90 | A | A | -1.1046 | |
91 | D | A | -1.3616 | |
92 | A | A | 0.0000 | |
93 | V | A | 0.0000 | |
94 | A | A | -0.6362 | |
95 | C | A | 0.0000 | |
96 | A | A | 0.0000 | |
97 | K | A | -1.7884 | |
98 | R | A | -2.0325 | |
99 | V | A | 0.0000 | |
100 | V | A | 0.0000 | |
101 | R | A | -3.2982 | |
102 | D | A | -2.6518 | |
103 | P | A | -1.6643 | |
104 | Q | A | -1.7842 | |
105 | G | A | -2.1898 | |
106 | I | A | -1.6011 | |
107 | R | A | -2.1069 | |
108 | A | A | -0.8512 | |
109 | W | A | 0.0000 | |
110 | V | A | 0.2956 | |
111 | A | A | -0.7506 | |
112 | W | A | 0.0000 | |
113 | R | A | -3.1514 | |
114 | N | A | -2.9362 | |
115 | R | A | -2.9121 | |
116 | C | A | 0.0000 | |
117 | Q | A | -3.7064 | |
118 | N | A | -3.5031 | |
119 | R | A | -4.3548 | |
120 | D | A | -3.7616 | |
121 | V | A | -3.0061 | |
122 | R | A | -3.3732 | |
123 | Q | A | -2.6967 | |
124 | Y | A | -1.7024 | |
125 | V | A | -1.2864 | |
126 | Q | A | -2.0782 | |
127 | G | A | -1.3059 | |
128 | C | A | 0.0000 | |
129 | G | A | -0.4159 | |
130 | V | A | -0.0153 |