Chain sequence(s) |
A: MEFVAKLFKFFKDLLGKFLGNN
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:25) [INFO] Main: Simulation completed successfully. (00:00:25) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | M | A | 0.6696 | |
2 | E | A | -0.7352 | |
3 | F | A | 1.0397 | |
4 | V | A | 1.0718 | |
5 | A | A | -0.1112 | |
6 | K | A | -0.8715 | |
7 | L | A | 0.9228 | |
8 | F | A | 1.4536 | |
9 | K | A | -0.8408 | |
10 | F | A | 1.0466 | |
11 | F | A | 0.8509 | |
12 | K | A | -1.1965 | |
13 | D | A | -1.3109 | |
14 | L | A | 0.3961 | |
15 | L | A | 1.1474 | |
16 | G | A | -0.4453 | |
17 | K | A | -1.0551 | |
18 | F | A | 1.7656 | |
19 | L | A | 1.3577 | |
20 | G | A | -0.4125 | |
21 | N | A | -2.0086 | |
22 | N | A | -2.0747 |