Chain sequence(s) |
H: QVQLQESGGGVVQPGRSLRLSCAASGFTFSSYAIHWVRQAPGKGLEWVAVISYDGSNRYYADSVKGRFTISRDNSKNTLYLQMNSLRPEDTAVYYCARDRFSAVASTPTYHNYFYMDVWGKGTTVTVSS
input PDB |
Selected Chain(s) | H |
Distance of aggregation | 5 Å |
FoldX usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.1158 | |
2 | V | H | -0.0475 | |
3 | Q | H | -1.1156 | |
4 | L | H | 0.0000 | |
5 | Q | H | -0.5993 | |
6 | E | H | 0.0000 | |
7 | S | H | -0.2243 | |
8 | G | H | -0.4582 | |
9 | G | H | -0.2960 | |
11 | G | H | 0.0772 | |
12 | V | H | 1.7317 | |
13 | V | H | 0.0000 | |
14 | Q | H | -1.2271 | |
15 | P | H | -0.4597 | |
16 | G | H | -0.8501 | |
17 | R | H | -1.9564 | |
18 | S | H | -0.5204 | |
19 | L | H | 0.0189 | |
20 | R | H | -1.0459 | |
21 | L | H | 0.0000 | |
22 | S | H | -0.0070 | |
23 | C | H | 0.0000 | |
24 | A | H | 0.0458 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.2631 | |
27 | G | H | -0.3870 | |
28 | F | H | 0.1878 | |
29 | T | H | -0.0197 | |
30 | F | H | 0.0000 | |
35 | S | H | -0.1533 | |
36 | S | H | -0.1836 | |
37 | Y | H | 0.3118 | |
38 | A | H | 0.0000 | |
39 | I | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.4093 | |
45 | A | H | 0.0000 | |
46 | P | H | -0.3389 | |
47 | G | H | -0.7115 | |
48 | K | H | -1.2958 | |
49 | G | H | -0.5920 | |
50 | L | H | 0.2447 | |
51 | E | H | -0.3153 | |
52 | W | H | 0.1203 | |
53 | V | H | 0.0000 | |
54 | A | H | 0.0000 | |
55 | V | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | S | H | 0.0714 | |
58 | Y | H | 0.3059 | |
59 | D | H | -1.5234 | |
62 | G | H | -0.3993 | |
63 | S | H | -0.3163 | |
64 | N | H | -0.8321 | |
65 | R | H | -1.6222 | |
66 | Y | H | 0.1751 | |
67 | Y | H | 0.3131 | |
68 | A | H | -0.2693 | |
69 | D | H | -1.9897 | |
70 | S | H | -0.4557 | |
71 | V | H | 0.0000 | |
72 | K | H | -1.9703 | |
74 | G | H | -0.8176 | |
75 | R | H | -0.3452 | |
76 | F | H | 0.0000 | |
77 | T | H | -0.0740 | |
78 | I | H | 0.0000 | |
79 | S | H | -0.0912 | |
80 | R | H | -0.2928 | |
81 | D | H | -0.5433 | |
82 | N | H | -0.6645 | |
83 | S | H | -0.5966 | |
84 | K | H | -1.8831 | |
85 | N | H | -1.1669 | |
86 | T | H | -0.1483 | |
87 | L | H | 0.0000 | |
88 | Y | H | 0.2562 | |
89 | L | H | 0.0000 | |
90 | Q | H | -0.4277 | |
91 | M | H | 0.0000 | |
92 | N | H | -0.4738 | |
93 | S | H | -0.3233 | |
94 | L | H | 0.0000 | |
95 | R | H | -1.8420 | |
96 | P | H | -0.8641 | |
97 | E | H | -1.6932 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.0176 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.4690 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.1851 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | 0.0000 | |
107 | D | H | 0.0000 | |
108 | R | H | -1.4900 | |
109 | F | H | 1.5661 | |
110 | S | H | 0.1397 | |
111 | A | H | 0.2936 | |
111A | V | H | 1.7835 | |
111B | A | H | 0.3337 | |
111C | S | H | -0.2145 | |
111D | T | H | -0.1100 | |
112E | P | H | -0.0878 | |
112D | T | H | -0.0385 | |
112C | Y | H | 0.0466 | |
112B | H | H | -1.0953 | |
112A | N | H | -0.7481 | |
112 | Y | H | 1.5054 | |
113 | F | H | 2.2750 | |
114 | Y | H | 0.9349 | |
115 | M | H | 0.0000 | |
116 | D | H | -1.2489 | |
117 | V | H | 0.0247 | |
118 | W | H | 0.3985 | |
119 | G | H | -0.3140 | |
120 | K | H | -1.7277 | |
121 | G | H | -0.3580 | |
122 | T | H | -0.0344 | |
123 | T | H | -0.0018 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.1827 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.1298 | |
128 | S | H | -0.2296 |