Chain sequence(s) |
A: SAVKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE
P: QPPVPPQRPM input PDB |
Selected Chain(s) | A,P |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:04) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:04) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:04) [INFO] runJob: Creating pdb object from: input.pdb (00:00:04) [INFO] FoldX: Starting FoldX energy minimalization (00:00:04) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:39) [INFO] Movie: Creting movie with webm format (00:05:16) [INFO] Main: Simulation completed successfully. (00:05:22) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
5 | S | A | -1.6725 | |
6 | A | A | -1.5549 | |
7 | V | A | 0.0000 | |
8 | K | A | -2.2722 | |
9 | A | A | 0.0000 | |
10 | L | A | -1.3402 | |
11 | F | A | -1.7891 | |
12 | D | A | -2.7352 | |
13 | Y | A | 0.0000 | |
14 | K | A | -2.6448 | |
15 | A | A | -2.3932 | |
16 | Q | A | -2.9996 | |
17 | R | A | -3.7015 | |
18 | E | A | -3.1614 | |
19 | D | A | -2.3658 | |
20 | E | A | 0.0000 | |
21 | L | A | 0.0000 | |
22 | T | A | -1.2503 | |
23 | F | A | 0.0000 | |
24 | T | A | -1.8523 | |
25 | K | A | -2.3152 | |
26 | S | A | -1.4095 | |
27 | A | A | 0.0000 | |
28 | I | A | 0.1046 | |
29 | I | A | 0.0000 | |
30 | Q | A | -1.8652 | |
31 | N | A | -2.7095 | |
32 | V | A | -2.4626 | |
33 | E | A | -3.2900 | |
34 | K | A | -3.4434 | |
35 | Q | A | -2.7549 | |
36 | D | A | -2.6090 | |
37 | G | A | -1.9002 | |
38 | G | A | -1.5036 | |
39 | W | A | 0.0000 | |
40 | W | A | -1.7723 | |
41 | R | A | -2.0873 | |
42 | G | A | 0.0000 | |
43 | D | A | -1.8965 | |
44 | Y | A | -0.8289 | |
45 | G | A | -0.8717 | |
46 | G | A | -1.3710 | |
47 | K | A | -1.8813 | |
48 | K | A | -2.6702 | |
49 | Q | A | -1.9997 | |
50 | L | A | -1.1795 | |
51 | W | A | -0.9823 | |
52 | F | A | 0.0000 | |
53 | P | A | 0.0000 | |
54 | S | A | -1.2768 | |
55 | N | A | -0.7477 | |
56 | Y | A | 0.0000 | |
57 | V | A | 0.0000 | |
58 | E | A | -3.0591 | |
59 | E | A | -2.9482 | |
1 | Q | P | -1.0763 | |
2 | P | P | -0.6599 | |
3 | P | P | 0.2641 | |
4 | V | P | 1.1543 | |
5 | P | P | 0.1105 | |
6 | P | P | -0.6147 | |
7 | Q | P | -1.1847 | |
8 | R | P | -1.1631 | |
9 | P | P | -0.2338 | |
10 | M | P | 0.7145 |