Chain sequence(s) |
A: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:31) [INFO] Movie: Creting movie with webm format (00:07:58) [INFO] Main: Simulation completed successfully. (00:08:01) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | M | A | 0.8756 | |
2 | D | A | 0.1434 | |
3 | V | A | 1.8819 | |
4 | F | A | 2.0784 | |
5 | M | A | 1.0316 | |
6 | K | A | -0.7322 | |
7 | G | A | -0.5732 | |
8 | L | A | -0.2110 | |
9 | S | A | -1.8329 | |
10 | K | A | -2.7897 | |
11 | A | A | -1.7159 | |
12 | K | A | -2.0349 | |
13 | E | A | -2.2311 | |
14 | G | A | -0.8049 | |
15 | V | A | 0.8471 | |
16 | V | A | 0.7947 | |
17 | A | A | -0.6023 | |
18 | A | A | -0.8832 | |
19 | A | A | -1.1367 | |
20 | E | A | -2.9598 | |
21 | K | A | -3.2142 | |
22 | T | A | -2.1358 | |
23 | K | A | -3.3075 | |
24 | Q | A | -3.1947 | |
25 | G | A | -1.9096 | |
26 | V | A | -0.3131 | |
27 | A | A | -1.4214 | |
28 | E | A | -2.5975 | |
29 | A | A | -1.4606 | |
30 | A | A | -1.5585 | |
31 | G | A | -2.6468 | |
32 | K | A | -3.2466 | |
33 | T | A | -2.2628 | |
34 | K | A | -2.8693 | |
35 | E | A | -2.0113 | |
36 | G | A | -0.5875 | |
37 | V | A | 1.5005 | |
38 | L | A | 1.9565 | |
39 | Y | A | 1.9658 | |
40 | V | A | 0.6836 | |
41 | G | A | -0.4652 | |
42 | S | A | -1.0853 | |
43 | K | A | -2.1468 | |
44 | T | A | -1.8632 | |
45 | K | A | -2.6329 | |
46 | E | A | -2.5411 | |
47 | G | A | -1.5464 | |
48 | V | A | -0.1040 | |
49 | V | A | 0.7874 | |
50 | H | A | -0.0999 | |
51 | G | A | 0.6982 | |
52 | V | A | 2.3953 | |
53 | A | A | 0.9138 | |
54 | T | A | 0.3908 | |
55 | V | A | 0.8087 | |
56 | A | A | -0.7908 | |
57 | E | A | -2.8795 | |
58 | K | A | -3.3083 | |
59 | T | A | -2.3480 | |
60 | K | A | -3.5762 | |
61 | E | A | -3.9129 | |
62 | Q | A | -2.6615 | |
63 | V | A | -0.1189 | |
64 | T | A | -1.3699 | |
65 | N | A | -1.3567 | |
66 | V | A | 0.8760 | |
67 | G | A | 0.6108 | |
68 | G | A | 0.7255 | |
69 | A | A | 1.6506 | |
70 | V | A | 3.0935 | |
71 | V | A | 3.0102 | |
72 | T | A | 1.9292 | |
73 | G | A | 2.0756 | |
74 | V | A | 2.9293 | |
75 | T | A | 1.4376 | |
76 | A | A | 0.8973 | |
77 | V | A | 1.3174 | |
78 | A | A | 0.3230 | |
79 | Q | A | -1.1790 | |
80 | K | A | -1.5715 | |
81 | T | A | -0.7143 | |
82 | V | A | 0.0003 | |
83 | E | A | -1.7760 | |
84 | G | A | -1.0900 | |
85 | A | A | 0.0448 | |
86 | G | A | -0.2180 | |
87 | S | A | 0.2874 | |
88 | I | A | 1.4645 | |
89 | A | A | 0.9104 | |
90 | A | A | 1.2361 | |
91 | A | A | 1.2749 | |
92 | T | A | 1.0202 | |
93 | G | A | 0.9125 | |
94 | F | A | 1.8629 | |
95 | V | A | 1.1823 | |
96 | K | A | -1.7131 | |
97 | K | A | -2.7409 | |
98 | D | A | -3.0747 | |
99 | Q | A | -2.2090 | |
100 | L | A | -0.6707 | |
101 | G | A | -1.6529 | |
102 | K | A | -2.9237 | |
103 | N | A | -3.5657 | |
104 | E | A | -3.8963 | |
105 | E | A | -3.7178 | |
106 | G | A | -2.2185 | |
107 | A | A | -1.7389 | |
108 | P | A | -1.9150 | |
109 | Q | A | -2.6299 | |
110 | E | A | -2.6546 | |
111 | G | A | -1.0230 | |
112 | I | A | 1.1834 | |
113 | L | A | 0.5604 | |
114 | E | A | -1.6046 | |
115 | D | A | -1.4977 | |
116 | M | A | 0.1690 | |
117 | P | A | -0.1108 | |
118 | V | A | -0.0059 | |
119 | D | A | -2.1761 | |
120 | P | A | -2.3540 | |
121 | D | A | -2.9884 | |
122 | N | A | -2.6312 | |
123 | E | A | -2.6808 | |
124 | A | A | -1.2478 | |
125 | Y | A | -0.3240 | |
126 | E | A | -2.0014 | |
127 | M | A | -0.8292 | |
128 | P | A | -1.2899 | |
129 | S | A | -1.6606 | |
130 | E | A | -2.7938 | |
131 | E | A | -2.7542 | |
132 | G | A | -2.0398 | |
133 | Y | A | -0.6750 | |
134 | Q | A | -1.8112 | |
135 | D | A | -2.2074 | |
136 | Y | A | -1.0889 | |
137 | E | A | -2.3465 | |
138 | P | A | -1.8129 | |
139 | E | A | -2.0778 | |
140 | A | A | -1.1262 |