| Chain sequence(s) |
A: GSMSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:44)
[INFO] Movie: Creting movie with webm format (00:04:24)
[INFO] Main: Simulation completed successfully. (00:04:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| -1 | G | A | -0.8533 | |
| 0 | S | A | -1.1754 | |
| 1 | M | A | -0.2016 | |
| 2 | S | A | -1.5461 | |
| 3 | D | A | -2.8581 | |
| 4 | Q | A | -3.0770 | |
| 5 | E | A | -3.0112 | |
| 6 | A | A | -1.9517 | |
| 7 | K | A | -2.7046 | |
| 8 | P | A | -1.9638 | |
| 9 | S | A | -1.5314 | |
| 10 | T | A | -1.5495 | |
| 11 | E | A | -2.7723 | |
| 12 | D | A | -2.6042 | |
| 13 | L | A | -0.7353 | |
| 14 | G | A | -1.9695 | |
| 15 | D | A | -3.4412 | |
| 16 | K | A | -3.9590 | |
| 17 | K | A | -4.6836 | |
| 18 | E | A | -3.9092 | |
| 19 | G | A | -3.0553 | |
| 20 | E | A | -2.9559 | |
| 21 | Y | A | -2.0326 | |
| 22 | I | A | 0.0000 | |
| 23 | K | A | -2.8349 | |
| 24 | L | A | 0.0000 | |
| 25 | K | A | -1.1764 | |
| 26 | V | A | 0.0000 | |
| 27 | I | A | -0.8954 | |
| 28 | G | A | 0.0000 | |
| 29 | Q | A | -2.6047 | |
| 30 | D | A | -3.0765 | |
| 31 | S | A | -1.8575 | |
| 32 | S | A | -1.6748 | |
| 33 | E | A | -1.9612 | |
| 34 | I | A | -0.3384 | |
| 35 | H | A | -0.7655 | |
| 36 | F | A | 0.3935 | |
| 37 | K | A | -1.6079 | |
| 38 | V | A | -1.2573 | |
| 39 | K | A | -1.9587 | |
| 40 | M | A | -1.3945 | |
| 41 | T | A | -0.9056 | |
| 42 | T | A | -1.2759 | |
| 43 | H | A | -2.5161 | |
| 44 | L | A | 0.0000 | |
| 45 | K | A | -2.7510 | |
| 46 | K | A | -2.3225 | |
| 47 | L | A | 0.0000 | |
| 48 | K | A | -1.8679 | |
| 49 | E | A | -2.5969 | |
| 50 | S | A | -2.0875 | |
| 51 | Y | A | -1.7576 | |
| 52 | C | A | 0.0000 | |
| 53 | Q | A | -2.6458 | |
| 54 | R | A | -3.1219 | |
| 55 | Q | A | -2.5844 | |
| 56 | G | A | -1.9276 | |
| 57 | V | A | -0.9258 | |
| 58 | P | A | -0.9894 | |
| 59 | M | A | 0.3301 | |
| 60 | N | A | -1.3592 | |
| 61 | S | A | -1.7578 | |
| 62 | L | A | 0.0000 | |
| 63 | R | A | -1.8916 | |
| 64 | F | A | 0.0000 | |
| 65 | L | A | -1.6898 | |
| 66 | F | A | 0.0000 | |
| 67 | E | A | -2.7403 | |
| 68 | G | A | -2.1972 | |
| 69 | Q | A | -2.7447 | |
| 70 | R | A | -2.9046 | |
| 71 | I | A | -1.9107 | |
| 72 | A | A | -1.4491 | |
| 73 | D | A | -2.4070 | |
| 74 | N | A | -2.5370 | |
| 75 | H | A | -2.4206 | |
| 76 | T | A | -1.9238 | |
| 77 | P | A | -1.7262 | |
| 78 | K | A | -2.7709 | |
| 79 | E | A | -2.0282 | |
| 80 | L | A | 0.0000 | |
| 81 | G | A | -1.6629 | |
| 82 | M | A | -1.5223 | |
| 83 | E | A | -3.7676 | |
| 84 | E | A | -3.9728 | |
| 85 | E | A | -3.0344 | |
| 86 | D | A | 0.0000 | |
| 87 | V | A | -0.4419 | |
| 88 | I | A | 0.0000 | |
| 89 | E | A | -1.5745 | |
| 90 | V | A | 0.0000 | |
| 91 | Y | A | -1.6898 | |
| 92 | Q | A | -2.6411 | |
| 93 | E | A | -3.3622 | |
| 94 | Q | A | -2.8039 | |
| 95 | T | A | -1.8781 | |
| 96 | G | A | -1.4793 | |
| 97 | G | A | -1.1296 | |
| 98 | H | A | -1.1708 | |
| 99 | S | A | -0.3843 | |
| 100 | T | A | 0.3238 | |
| 101 | V | A | 1.3883 |