Chain sequence(s) |
A: GSMSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTV
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:44) [INFO] Movie: Creting movie with webm format (00:04:24) [INFO] Main: Simulation completed successfully. (00:04:26) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
-1 | G | A | -0.8533 | |
0 | S | A | -1.1754 | |
1 | M | A | -0.2016 | |
2 | S | A | -1.5461 | |
3 | D | A | -2.8581 | |
4 | Q | A | -3.0770 | |
5 | E | A | -3.0112 | |
6 | A | A | -1.9517 | |
7 | K | A | -2.7046 | |
8 | P | A | -1.9638 | |
9 | S | A | -1.5314 | |
10 | T | A | -1.5495 | |
11 | E | A | -2.7723 | |
12 | D | A | -2.6042 | |
13 | L | A | -0.7353 | |
14 | G | A | -1.9695 | |
15 | D | A | -3.4412 | |
16 | K | A | -3.9590 | |
17 | K | A | -4.6836 | |
18 | E | A | -3.9092 | |
19 | G | A | -3.0553 | |
20 | E | A | -2.9559 | |
21 | Y | A | -2.0326 | |
22 | I | A | 0.0000 | |
23 | K | A | -2.8349 | |
24 | L | A | 0.0000 | |
25 | K | A | -1.1764 | |
26 | V | A | 0.0000 | |
27 | I | A | -0.8954 | |
28 | G | A | 0.0000 | |
29 | Q | A | -2.6047 | |
30 | D | A | -3.0765 | |
31 | S | A | -1.8575 | |
32 | S | A | -1.6748 | |
33 | E | A | -1.9612 | |
34 | I | A | -0.3384 | |
35 | H | A | -0.7655 | |
36 | F | A | 0.3935 | |
37 | K | A | -1.6079 | |
38 | V | A | -1.2573 | |
39 | K | A | -1.9587 | |
40 | M | A | -1.3945 | |
41 | T | A | -0.9056 | |
42 | T | A | -1.2759 | |
43 | H | A | -2.5161 | |
44 | L | A | 0.0000 | |
45 | K | A | -2.7510 | |
46 | K | A | -2.3225 | |
47 | L | A | 0.0000 | |
48 | K | A | -1.8679 | |
49 | E | A | -2.5969 | |
50 | S | A | -2.0875 | |
51 | Y | A | -1.7576 | |
52 | C | A | 0.0000 | |
53 | Q | A | -2.6458 | |
54 | R | A | -3.1219 | |
55 | Q | A | -2.5844 | |
56 | G | A | -1.9276 | |
57 | V | A | -0.9258 | |
58 | P | A | -0.9894 | |
59 | M | A | 0.3301 | |
60 | N | A | -1.3592 | |
61 | S | A | -1.7578 | |
62 | L | A | 0.0000 | |
63 | R | A | -1.8916 | |
64 | F | A | 0.0000 | |
65 | L | A | -1.6898 | |
66 | F | A | 0.0000 | |
67 | E | A | -2.7403 | |
68 | G | A | -2.1972 | |
69 | Q | A | -2.7447 | |
70 | R | A | -2.9046 | |
71 | I | A | -1.9107 | |
72 | A | A | -1.4491 | |
73 | D | A | -2.4070 | |
74 | N | A | -2.5370 | |
75 | H | A | -2.4206 | |
76 | T | A | -1.9238 | |
77 | P | A | -1.7262 | |
78 | K | A | -2.7709 | |
79 | E | A | -2.0282 | |
80 | L | A | 0.0000 | |
81 | G | A | -1.6629 | |
82 | M | A | -1.5223 | |
83 | E | A | -3.7676 | |
84 | E | A | -3.9728 | |
85 | E | A | -3.0344 | |
86 | D | A | 0.0000 | |
87 | V | A | -0.4419 | |
88 | I | A | 0.0000 | |
89 | E | A | -1.5745 | |
90 | V | A | 0.0000 | |
91 | Y | A | -1.6898 | |
92 | Q | A | -2.6411 | |
93 | E | A | -3.3622 | |
94 | Q | A | -2.8039 | |
95 | T | A | -1.8781 | |
96 | G | A | -1.4793 | |
97 | G | A | -1.1296 | |
98 | H | A | -1.1708 | |
99 | S | A | -0.3843 | |
100 | T | A | 0.3238 | |
101 | V | A | 1.3883 |