Chain sequence(s) |
H: EVQLQESGPGLVKPSQSLSLTCTVTGYLITSDIVWTWIRQFPDNTLEWMGYITYSGSTGYNPSLNGRISVTRDTSKSQFFLQLNSVTSEDTATYYCVYGHFYSMDYWGQGTSVTVSS
L: SPVTLFVTPGHSVSLSCRASQSISSNLHWYQQESHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGLYFCQQSYSWPLTFGAGTKLELK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:07) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:07) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:07) [INFO] runJob: Creating pdb object from: input.pdb (00:00:07) [INFO] FoldX: Starting FoldX energy minimalization (00:00:07) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:47) [INFO] Main: Simulation completed successfully. (00:00:49) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | E | H | -1.9811 | |
2 | V | H | -0.8179 | |
3 | Q | H | -1.4326 | |
4 | L | H | -0.9212 | |
5 | Q | H | -1.6901 | |
6 | E | H | 0.0000 | |
7 | S | H | -0.7639 | |
8 | G | H | -0.5927 | |
9 | P | H | -0.3101 | |
11 | G | H | -0.1528 | |
12 | L | H | 0.5686 | |
13 | V | H | 0.0000 | |
14 | K | H | -1.0273 | |
15 | P | H | -1.3149 | |
16 | S | H | -1.2224 | |
17 | Q | H | -1.6748 | |
18 | S | H | -1.3736 | |
19 | L | H | 0.0000 | |
20 | S | H | -0.7153 | |
21 | L | H | 0.0000 | |
22 | T | H | -0.5040 | |
23 | C | H | 0.0000 | |
24 | T | H | -1.0124 | |
25 | V | H | 0.0000 | |
26 | T | H | -0.8395 | |
27 | G | H | -0.8167 | |
28 | Y | H | 0.1619 | |
29 | L | H | 0.8407 | |
30 | I | H | 0.0000 | |
31 | T | H | 0.2660 | |
35 | S | H | 0.0189 | |
36 | D | H | -0.3456 | |
37 | I | H | 0.0000 | |
38 | V | H | 0.0000 | |
39 | W | H | 0.0000 | |
40 | T | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | I | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.5282 | |
45 | F | H | -0.8382 | |
46 | P | H | -1.3300 | |
47 | D | H | -2.0392 | |
48 | N | H | -1.3421 | |
49 | T | H | -0.8295 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.2138 | |
52 | W | H | 0.0000 | |
53 | M | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | Y | H | 0.2333 | |
56 | I | H | 0.0000 | |
57 | T | H | -0.0328 | |
58 | Y | H | 0.3357 | |
59 | S | H | -0.1951 | |
63 | G | H | -0.2685 | |
64 | S | H | -0.2590 | |
65 | T | H | -0.0715 | |
66 | G | H | -0.0211 | |
67 | Y | H | -0.1104 | |
68 | N | H | 0.0000 | |
69 | P | H | -0.7401 | |
70 | S | H | -0.8001 | |
71 | L | H | 0.0000 | |
72 | N | H | -1.7321 | |
74 | G | H | -1.4277 | |
75 | R | H | -1.4588 | |
76 | I | H | 0.0000 | |
77 | S | H | -0.6583 | |
78 | V | H | 0.0000 | |
79 | T | H | -0.3789 | |
80 | R | H | -0.8821 | |
81 | D | H | -1.2791 | |
82 | T | H | -0.9764 | |
83 | S | H | -1.2961 | |
84 | K | H | -2.0027 | |
85 | S | H | -0.9735 | |
86 | Q | H | -1.0335 | |
87 | F | H | 0.0000 | |
88 | F | H | -0.1148 | |
89 | L | H | 0.0000 | |
90 | Q | H | -0.8319 | |
91 | L | H | 0.0000 | |
92 | N | H | -1.4740 | |
93 | S | H | -1.2493 | |
94 | V | H | 0.0000 | |
95 | T | H | -1.2713 | |
96 | S | H | -1.3040 | |
97 | E | H | -1.9293 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.6379 | |
100 | A | H | 0.0000 | |
101 | T | H | -0.3708 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | V | H | 0.0000 | |
106 | Y | H | 0.1964 | |
107 | G | H | 0.0000 | |
108 | H | H | 0.2590 | |
109 | F | H | 1.3925 | |
113 | Y | H | 1.4935 | |
114 | S | H | 0.0000 | |
115 | M | H | 0.0000 | |
116 | D | H | -0.1472 | |
117 | Y | H | 0.1149 | |
118 | W | H | -0.4700 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.9456 | |
121 | G | H | -1.2722 | |
122 | T | H | -0.7984 | |
123 | S | H | -0.2931 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.2332 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.5597 | |
128 | S | H | -0.4557 | |
7 | S | L | -0.0620 | |
8 | P | L | 0.3272 | |
9 | V | L | 1.8816 | |
10 | T | L | 1.4409 | |
11 | L | L | 1.6027 | |
12 | F | L | 1.9942 | |
13 | V | L | 0.5932 | |
14 | T | L | -0.4993 | |
15 | P | L | -1.3043 | |
16 | G | L | -1.7153 | |
17 | H | L | -1.8683 | |
18 | S | L | -1.6443 | |
19 | V | L | 0.0000 | |
20 | S | L | -0.5791 | |
21 | L | L | 0.0000 | |
22 | S | L | -0.9641 | |
23 | C | L | 0.0000 | |
24 | R | L | -2.5627 | |
25 | A | L | -1.6992 | |
26 | S | L | -1.3468 | |
27 | Q | L | -1.6611 | |
28 | S | L | -1.1493 | |
29 | I | L | 0.0000 | |
36 | S | L | -0.3696 | |
37 | S | L | -0.1771 | |
38 | N | L | 0.5424 | |
39 | L | L | 0.0000 | |
40 | H | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | 0.0000 | |
45 | E | L | -1.4366 | |
46 | S | L | -1.2347 | |
47 | H | L | -2.0008 | |
48 | E | L | -2.3250 | |
49 | S | L | -1.3999 | |
50 | P | L | 0.0000 | |
51 | R | L | -0.7618 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | K | L | -0.3093 | |
56 | Y | L | 0.1624 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.8772 | |
66 | Q | L | -1.2709 | |
67 | S | L | -0.6925 | |
68 | I | L | -0.3897 | |
69 | S | L | -0.3806 | |
70 | G | L | -0.3985 | |
71 | I | L | -0.1203 | |
72 | P | L | -0.2496 | |
74 | S | L | -0.5843 | |
75 | R | L | -1.1204 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.8845 | |
78 | G | L | -0.6498 | |
79 | S | L | -0.7471 | |
80 | G | L | -0.9436 | |
83 | S | L | -0.9326 | |
84 | G | L | -1.1588 | |
85 | T | L | -1.6409 | |
86 | D | L | -1.9831 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.8448 | |
89 | L | L | 0.0000 | |
90 | S | L | -0.7346 | |
91 | I | L | 0.0000 | |
92 | N | L | -2.1118 | |
93 | S | L | -1.8937 | |
94 | V | L | 0.0000 | |
95 | E | L | -2.5229 | |
96 | T | L | -1.2506 | |
97 | E | L | -1.7034 | |
98 | D | L | 0.0000 | |
99 | F | L | -0.1020 | |
100 | G | L | 0.0000 | |
101 | L | L | -0.0877 | |
102 | Y | L | 0.0000 | |
103 | F | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.4607 | |
107 | S | L | 1.2021 | |
108 | Y | L | 1.4435 | |
109 | S | L | 0.8089 | |
114 | W | L | 1.1269 | |
115 | P | L | 0.6159 | |
116 | L | L | 0.7237 | |
117 | T | L | 0.2621 | |
118 | F | L | 0.0200 | |
119 | G | L | -0.5052 | |
120 | A | L | -0.3238 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.2964 | |
123 | K | L | 0.5926 | |
124 | L | L | 0.0000 | |
125 | E | L | 0.5704 | |
126 | L | L | 1.0731 | |
127 | K | L | -0.3571 |