Chain sequence(s) |
A: GIVEQCCTSICSLYQLENYCN
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08) [CRITICAL] pyMol: Pymol encountered an error: /bin/sh: pymol: command not found Movie creation failed. (00:00:08) [INFO] Main: Simulation completed successfully. (00:00:08) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | G | A | 0.7852 | |
2 | I | A | 2.0724 | |
3 | V | A | 1.5510 | |
4 | E | A | -0.5704 | |
5 | Q | A | -0.4945 | |
6 | C | A | 0.3213 | |
7 | C | A | 0.3807 | |
8 | T | A | 0.1392 | |
9 | S | A | 0.2666 | |
10 | I | A | 1.7381 | |
11 | C | A | 1.3812 | |
12 | S | A | 1.3333 | |
13 | L | A | 1.7843 | |
14 | Y | A | 1.2792 | |
15 | Q | A | -0.1114 | |
16 | L | A | -0.2187 | |
17 | E | A | -1.6805 | |
18 | N | A | -1.7146 | |
19 | Y | A | 0.1763 | |
20 | C | A | 0.1116 | |
21 | N | A | -1.3266 |