Project name: 775-136

Status: done

Started: 2024-04-23 18:04:01
Settings
Chain sequence(s) A: MKMEMKTQKTEQPHKYKEGDRTEIVQIGFYKRGNEITIKQIPYYVKKVPDKLPDEIQSLYRAFAHRYKDQNHPTVTGFEKWDTSKIKNMSYVFYDNQLIDADLSEWKTSNVTNMDGMFKNAIKFNNKEKPLKWNTEKVESMESMFDGAESFKQNLKDWKVDKVTKNKNFSRASGIFEHIDKKPSWKITEHNDPIIKKPESTEPKVIIHPSPSRPKQTIPLTKLINPIIKSTPNSNQNLGIPKTNLSTTPQQSKKLSTPAIVGIVVGSQVVLTSLAAGIPYLIKRFKK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:51)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:53)
Show buried residues

Minimal score value
-4.1133
Maximal score value
2.9192
Average score
-1.2266
Total score value
-352.0401

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.3034
2 K A -1.0927
3 M A -0.1659
4 E A -1.4683
5 M A -0.5729
6 K A -2.0436
7 T A -2.4321
8 Q A -3.1008
9 K A -3.4128
10 T A -2.1758
11 E A -2.6463
12 Q A -1.8308
13 P A -1.3083
14 H A -1.0433
15 K A -1.7773
16 Y A -2.4519
17 K A -3.3108
18 E A -3.9220
19 G A -3.2793
20 D A -3.5730
21 R A -3.8330
22 T A -2.4116
23 E A -2.6236
24 I A 0.0000
25 V A -0.3163
26 Q A -0.4629
27 I A 0.0000
28 G A 0.0000
29 F A 0.0000
30 Y A -2.1689
31 K A -3.5156
32 R A -3.4499
33 G A -2.9163
34 N A -3.4398
35 E A -3.4665
36 I A 0.0000
37 T A 0.0000
38 I A 0.0000
39 K A -1.2587
40 Q A -0.9075
41 I A 0.0000
42 P A 0.1075
43 Y A 0.4377
44 Y A -0.3016
45 V A 0.0000
46 K A -1.5890
47 K A -1.9518
48 V A 0.0000
49 P A -1.6274
50 D A -3.1638
51 K A -2.5274
52 L A 0.0000
53 P A -2.0914
54 D A -3.0091
55 E A -2.7824
56 I A 0.0000
57 Q A -2.5662
58 S A 0.0000
59 L A 0.0000
60 Y A -0.0589
61 R A -0.6096
62 A A 0.0000
63 F A 0.0000
64 A A -0.4206
65 H A -1.1462
66 R A -0.9532
67 Y A -1.9757
68 K A -3.1470
69 D A -3.3560
70 Q A -3.1566
71 N A -2.5301
72 H A -1.6901
73 P A -0.6472
74 T A -0.5371
75 V A 0.0000
76 T A -1.2033
77 G A 0.0000
78 F A 0.0000
79 E A -3.3946
80 K A -4.1133
81 W A 0.0000
82 D A -2.8180
83 T A 0.0000
84 S A -2.2739
85 K A -3.1732
86 I A 0.0000
87 K A -2.7445
88 N A -1.6073
89 M A 0.0000
90 S A 0.0000
91 Y A -0.0602
92 V A 0.0000
93 F A 0.0000
94 Y A -0.6753
95 D A -1.4835
96 N A 0.0000
97 Q A -1.9795
98 L A -0.9040
99 I A 0.0000
100 D A -1.1593
101 A A 0.0000
102 D A -2.2726
103 L A 0.0000
104 S A 0.0000
105 E A -3.9297
106 W A 0.0000
107 K A -2.8999
108 T A 0.0000
109 S A -2.0908
110 N A -2.4314
111 V A 0.0000
112 T A -2.2846
113 N A -1.8311
114 M A 0.0000
115 D A -1.0520
116 G A 0.0000
117 M A 0.0000
118 F A 0.0000
119 K A -1.4095
120 N A -2.1876
121 A A 0.0000
122 I A -1.7463
123 K A -2.3963
124 F A 0.0000
125 N A -2.1140
126 N A 0.0000
127 K A -3.2725
128 E A -3.5542
129 K A -3.2132
130 P A -2.6874
131 L A 0.0000
132 K A -3.1722
133 W A 0.0000
134 N A -2.6242
135 T A 0.0000
136 E A -2.9942
137 K A -3.2353
138 V A 0.0000
139 E A -3.3022
140 S A -2.1690
141 M A 0.0000
142 E A -1.6771
143 S A -1.2308
144 M A 0.0000
145 F A 0.0000
146 D A -1.6615
147 G A -2.0314
148 A A 0.0000
149 E A -2.8594
150 S A -1.6225
151 F A 0.0000
152 K A -2.3016
153 Q A 0.0000
154 N A -2.6643
155 L A 0.0000
156 K A -3.3937
157 D A -2.6747
158 W A 0.0000
159 K A -2.7123
160 V A 0.0000
161 D A -2.8870
162 K A -3.4374
163 V A 0.0000
164 T A -1.7853
165 K A -1.9569
166 N A 0.0000
167 K A -1.1420
168 N A 0.0000
169 F A -0.8649
170 S A 0.0000
171 R A -2.5260
172 A A -1.6964
173 S A -1.7529
174 G A 0.0000
175 I A -1.2890
176 F A -1.0106
177 E A -1.9254
178 H A -1.9794
179 I A -0.6865
180 D A -2.3795
181 K A -3.0157
182 K A -2.4799
183 P A -1.8219
184 S A -1.2151
185 W A -0.9159
186 K A -0.9440
187 I A 0.6742
188 T A -0.2634
189 E A 0.0000
190 H A -2.0075
191 N A -1.9822
192 D A -1.9874
193 P A -1.9274
194 I A -1.5356
195 I A 0.0000
196 K A -3.4639
197 K A -3.2653
198 P A -2.8659
199 E A -3.3833
200 S A -2.3812
201 T A -2.3476
202 E A -2.7143
203 P A -2.1338
204 K A -1.3224
205 V A 1.4598
206 I A 2.9192
207 I A 2.6981
208 H A 0.2198
209 P A -0.1314
210 S A -0.6020
211 P A -0.7969
212 S A -1.3725
213 R A -2.2141
214 P A -2.2001
215 K A -2.9898
216 Q A -2.2071
217 T A -0.6943
218 I A -0.2770
219 P A -0.1160
220 L A 0.2628
221 T A -0.7095
222 K A -1.5658
223 L A -0.4840
224 I A -0.1042
225 N A -0.7099
226 P A 0.4792
227 I A 2.1211
228 I A 1.8309
229 K A -0.3957
230 S A -1.3206
231 T A -1.3985
232 P A -1.1105
233 N A -2.0071
234 S A -2.2154
235 N A -2.5379
236 Q A -2.4853
237 N A -1.8349
238 L A -0.8719
239 G A -0.3950
240 I A 0.4619
241 P A -0.2116
242 K A -1.6068
243 T A -1.1179
244 N A -1.6426
245 L A -0.6526
246 S A -0.4998
247 T A -0.7224
248 T A -1.2047
249 P A -1.6533
250 Q A -2.5293
251 Q A -2.7267
252 S A -2.3806
253 K A -3.2986
254 K A -3.1531
255 L A 0.0000
256 S A -1.4896
257 T A -0.7172
258 P A -0.2870
259 A A 0.3548
260 I A 0.8894
261 V A 0.0000
262 G A 0.0000
263 I A 0.0000
264 V A 0.1051
265 V A -0.2412
266 G A -0.6210
267 S A -0.5081
268 Q A -0.6871
269 V A 0.8717
270 V A 0.9323
271 L A 0.9961
272 T A 0.2984
273 S A -0.2878
274 L A 0.0000
275 A A 0.0000
276 A A 0.2192
277 G A -0.2308
278 I A 0.5857
279 P A 0.2060
280 Y A 0.7957
281 L A 0.0535
282 I A -0.5710
283 K A -2.5297
284 R A -2.6770
285 F A -1.2561
286 K A -3.0697
287 K A -3.2037
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Laboratory of Theory of Biopolymers 2018