| Chain sequence(s) |
A: DAPTVNDVTSDATQVTGQAEPNSTVKLTFPDGTTATGTADDQGNYTIDIPSNVDLNGGEELQVTATDKDGNTSEPSSANVTDTTAPDAPTVNDVTSDATQVTGQAEPNSTVKLTFPDGTTATGTADDQGNYTIDIPSNVDLNGGEELQVTATDKDGNTSESTNTTII
B: DAPTVNDVTSDATQVTGQAEPNSTVKLTFPDGTTATGTADDQGNYTIDIPSNVDLNGGEELQVTATDKDGNTSEPSSANVTDTTAPDAPTVNDVTSDATQVTGQAEPNSTVKLTFPDGTTATGTADDQGNYTIDIPSNVDLNGGEELQVTATDKDGNTSESTNTTII input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 29 | D | A | -2.7089 | |
| 30 | A | A | -1.8233 | |
| 31 | P | A | 0.0000 | |
| 32 | T | A | -0.7147 | |
| 33 | V | A | -0.5442 | |
| 34 | N | A | -1.2450 | |
| 35 | D | A | -1.9202 | |
| 36 | V | A | 0.0000 | |
| 37 | T | A | 0.0000 | |
| 38 | S | A | -1.3134 | |
| 39 | D | A | -1.0007 | |
| 40 | A | A | -0.6484 | |
| 41 | T | A | -0.8669 | |
| 42 | Q | A | -1.0495 | |
| 43 | V | A | 0.0000 | |
| 44 | T | A | 0.0000 | |
| 45 | G | A | 0.0000 | |
| 46 | Q | A | -1.7555 | |
| 47 | A | A | -2.5066 | |
| 48 | E | A | -3.4273 | |
| 49 | P | A | -3.3134 | |
| 50 | N | A | -3.2952 | |
| 51 | S | A | 0.0000 | |
| 52 | T | A | -1.4534 | |
| 53 | V | A | 0.0000 | |
| 54 | K | A | -1.1867 | |
| 55 | L | A | 0.0000 | |
| 56 | T | A | -1.1584 | |
| 57 | F | A | 0.0000 | |
| 58 | P | A | -1.6996 | |
| 59 | D | A | -2.3114 | |
| 60 | G | A | -1.4488 | |
| 61 | T | A | -1.0036 | |
| 62 | T | A | -0.7319 | |
| 63 | A | A | -0.6963 | |
| 64 | T | A | -0.8283 | |
| 65 | G | A | -1.0395 | |
| 66 | T | A | -1.4365 | |
| 67 | A | A | 0.0000 | |
| 68 | D | A | -3.3638 | |
| 69 | D | A | -3.6836 | |
| 70 | Q | A | -3.2728 | |
| 71 | G | A | 0.0000 | |
| 72 | N | A | -2.6419 | |
| 73 | Y | A | 0.0000 | |
| 74 | T | A | -0.9742 | |
| 75 | I | A | 0.0000 | |
| 76 | D | A | -1.8991 | |
| 77 | I | A | -1.2629 | |
| 78 | P | A | -1.2163 | |
| 79 | S | A | -1.3454 | |
| 80 | N | A | -1.6957 | |
| 81 | V | A | -1.7726 | |
| 82 | D | A | -2.5275 | |
| 83 | L | A | -1.8864 | |
| 84 | N | A | -2.0175 | |
| 85 | G | A | -2.0748 | |
| 86 | G | A | -1.7368 | |
| 87 | E | A | -2.0168 | |
| 88 | E | A | -2.4196 | |
| 89 | L | A | 0.0000 | |
| 90 | Q | A | -1.5308 | |
| 91 | V | A | 0.0000 | |
| 92 | T | A | -1.2464 | |
| 93 | A | A | 0.0000 | |
| 94 | T | A | -2.4908 | |
| 95 | D | A | -3.1794 | |
| 96 | K | A | -3.3777 | |
| 97 | D | A | -3.3786 | |
| 98 | G | A | -2.6483 | |
| 99 | N | A | -2.9191 | |
| 100 | T | A | -2.1715 | |
| 101 | S | A | 0.0000 | |
| 102 | E | A | -2.4903 | |
| 103 | P | A | -1.6071 | |
| 104 | S | A | -0.9211 | |
| 105 | S | A | -1.2316 | |
| 106 | A | A | -1.5999 | |
| 107 | N | A | -2.6096 | |
| 108 | V | A | 0.0000 | |
| 109 | T | A | -1.8544 | |
| 110 | D | A | -2.0408 | |
| 111 | T | A | 0.0000 | |
| 112 | T | A | -1.2544 | |
| 113 | A | A | -1.8851 | |
| 114 | P | A | 0.0000 | |
| 115 | D | A | -2.4057 | |
| 116 | A | A | -1.7858 | |
| 117 | P | A | 0.0000 | |
| 118 | T | A | -1.1420 | |
| 119 | V | A | -1.0378 | |
| 120 | N | A | -1.9531 | |
| 121 | D | A | -1.8967 | |
| 122 | V | A | 0.0000 | |
| 123 | T | A | -0.6015 | |
| 124 | S | A | -0.9844 | |
| 125 | D | A | -2.0372 | |
| 126 | A | A | -1.6102 | |
| 127 | T | A | -1.5882 | |
| 128 | Q | A | -1.8883 | |
| 129 | V | A | 0.0000 | |
| 130 | T | A | -1.3201 | |
| 131 | G | A | 0.0000 | |
| 132 | Q | A | -1.7357 | |
| 133 | A | A | -2.1326 | |
| 134 | E | A | -2.7241 | |
| 135 | P | A | -2.9392 | |
| 136 | N | A | -3.1120 | |
| 137 | S | A | 0.0000 | |
| 138 | T | A | -1.3591 | |
| 139 | V | A | 0.0000 | |
| 140 | K | A | -1.1809 | |
| 141 | L | A | 0.0000 | |
| 142 | T | A | -0.7223 | |
| 143 | F | A | 0.0000 | |
| 144 | P | A | 0.0000 | |
| 145 | D | A | -2.2260 | |
| 146 | G | A | -1.4905 | |
| 147 | T | A | -0.6295 | |
| 148 | T | A | -0.6226 | |
| 149 | A | A | -0.7495 | |
| 150 | T | A | -0.8745 | |
| 151 | G | A | -1.0546 | |
| 152 | T | A | -1.3595 | |
| 153 | A | A | 0.0000 | |
| 154 | D | A | -3.3522 | |
| 155 | D | A | -3.6271 | |
| 156 | Q | A | -3.1761 | |
| 157 | G | A | 0.0000 | |
| 158 | N | A | -2.4895 | |
| 159 | Y | A | 0.0000 | |
| 160 | T | A | -1.1016 | |
| 161 | I | A | 0.0000 | |
| 162 | D | A | -2.2550 | |
| 163 | I | A | 0.0000 | |
| 164 | P | A | -1.4293 | |
| 165 | S | A | -1.6735 | |
| 166 | N | A | -1.7244 | |
| 167 | V | A | -1.4438 | |
| 168 | D | A | -2.3808 | |
| 169 | L | A | 0.0000 | |
| 170 | N | A | -0.9566 | |
| 171 | G | A | 0.0130 | |
| 172 | G | A | -0.0602 | |
| 173 | E | A | 0.0000 | |
| 174 | E | A | 0.0000 | |
| 175 | L | A | 0.0000 | |
| 176 | Q | A | 0.0000 | |
| 177 | V | A | 0.0000 | |
| 178 | T | A | -1.1898 | |
| 179 | A | A | 0.0000 | |
| 180 | T | A | -1.9110 | |
| 181 | D | A | -2.2760 | |
| 182 | K | A | -3.0810 | |
| 183 | D | A | -3.0310 | |
| 184 | G | A | -2.0489 | |
| 185 | N | A | -1.7248 | |
| 186 | T | A | -1.7510 | |
| 187 | S | A | 0.0000 | |
| 188 | E | A | -2.6721 | |
| 189 | S | A | -1.6782 | |
| 190 | T | A | -0.9308 | |
| 191 | N | A | -0.6497 | |
| 192 | T | A | -0.6019 | |
| 193 | T | A | -0.1578 | |
| 194 | I | A | 0.0000 | |
| 195 | I | A | 1.2223 | |
| 29 | D | B | -2.6630 | |
| 30 | A | B | -1.8159 | |
| 31 | P | B | 0.0000 | |
| 32 | T | B | -0.6663 | |
| 33 | V | B | -0.4524 | |
| 34 | N | B | -1.2082 | |
| 35 | D | B | -1.9106 | |
| 36 | V | B | 0.0000 | |
| 37 | T | B | 0.0000 | |
| 38 | S | B | -1.2622 | |
| 39 | D | B | -1.0581 | |
| 40 | A | B | -0.9167 | |
| 41 | T | B | -0.9911 | |
| 42 | Q | B | -1.1906 | |
| 43 | V | B | 0.0000 | |
| 44 | T | B | 0.0000 | |
| 45 | G | B | 0.0000 | |
| 46 | Q | B | -1.8224 | |
| 47 | A | B | -2.3594 | |
| 48 | E | B | -3.2643 | |
| 49 | P | B | -3.1642 | |
| 50 | N | B | -3.1816 | |
| 51 | S | B | 0.0000 | |
| 52 | T | B | -1.4001 | |
| 53 | V | B | 0.0000 | |
| 54 | K | B | -1.0181 | |
| 55 | L | B | 0.0000 | |
| 56 | T | B | -1.0933 | |
| 57 | F | B | 0.0000 | |
| 58 | P | B | -1.7087 | |
| 59 | D | B | -2.1603 | |
| 60 | G | B | -1.4451 | |
| 61 | T | B | -1.0024 | |
| 62 | T | B | -0.6782 | |
| 63 | A | B | -0.6489 | |
| 64 | T | B | -0.7580 | |
| 65 | G | B | -0.9996 | |
| 66 | T | B | -1.4041 | |
| 67 | A | B | 0.0000 | |
| 68 | D | B | -3.2859 | |
| 69 | D | B | -3.6194 | |
| 70 | Q | B | -3.1764 | |
| 71 | G | B | 0.0000 | |
| 72 | N | B | -2.5798 | |
| 73 | Y | B | 0.0000 | |
| 74 | T | B | -1.0131 | |
| 75 | I | B | 0.0000 | |
| 76 | D | B | -1.9445 | |
| 77 | I | B | -1.3319 | |
| 78 | P | B | -1.2603 | |
| 79 | S | B | -1.4252 | |
| 80 | N | B | -1.7599 | |
| 81 | V | B | -1.8022 | |
| 82 | D | B | -2.4826 | |
| 83 | L | B | 0.0000 | |
| 84 | N | B | -2.1072 | |
| 85 | G | B | -2.1235 | |
| 86 | G | B | -1.7076 | |
| 87 | E | B | -2.1779 | |
| 88 | E | B | -2.2887 | |
| 89 | L | B | 0.0000 | |
| 90 | Q | B | -1.4018 | |
| 91 | V | B | 0.0000 | |
| 92 | T | B | -1.2239 | |
| 93 | A | B | 0.0000 | |
| 94 | T | B | -2.4542 | |
| 95 | D | B | -3.1300 | |
| 96 | K | B | -3.3712 | |
| 97 | D | B | -3.3826 | |
| 98 | G | B | -2.6400 | |
| 99 | N | B | -2.7322 | |
| 100 | T | B | -2.1526 | |
| 101 | S | B | 0.0000 | |
| 102 | E | B | -2.5112 | |
| 103 | P | B | -1.6338 | |
| 104 | S | B | -0.8929 | |
| 105 | S | B | -0.9916 | |
| 106 | A | B | -1.5166 | |
| 107 | N | B | -2.5246 | |
| 108 | V | B | 0.0000 | |
| 109 | T | B | -1.8625 | |
| 110 | D | B | -2.0817 | |
| 111 | T | B | 0.0000 | |
| 112 | T | B | -1.3015 | |
| 113 | A | B | -1.9049 | |
| 114 | P | B | 0.0000 | |
| 115 | D | B | -2.3725 | |
| 116 | A | B | -1.8005 | |
| 117 | P | B | 0.0000 | |
| 118 | T | B | -1.3264 | |
| 119 | V | B | -1.2429 | |
| 120 | N | B | -2.2329 | |
| 121 | D | B | -2.0023 | |
| 122 | V | B | 0.0000 | |
| 123 | T | B | -0.5981 | |
| 124 | S | B | -0.8904 | |
| 125 | D | B | -1.9943 | |
| 126 | A | B | -1.5604 | |
| 127 | T | B | -1.5023 | |
| 128 | Q | B | -1.7756 | |
| 129 | V | B | 0.0000 | |
| 130 | T | B | -1.4386 | |
| 131 | G | B | 0.0000 | |
| 132 | Q | B | -2.1260 | |
| 133 | A | B | -2.2883 | |
| 134 | E | B | -2.7462 | |
| 135 | P | B | -2.8178 | |
| 136 | N | B | -2.8614 | |
| 137 | S | B | 0.0000 | |
| 138 | T | B | -1.2943 | |
| 139 | V | B | 0.0000 | |
| 140 | K | B | -1.0502 | |
| 141 | L | B | 0.0000 | |
| 142 | T | B | -0.7047 | |
| 143 | F | B | 0.0000 | |
| 144 | P | B | 0.0000 | |
| 145 | D | B | -2.2761 | |
| 146 | G | B | -1.5126 | |
| 147 | T | B | -0.6439 | |
| 148 | T | B | -0.5479 | |
| 149 | A | B | -0.6598 | |
| 150 | T | B | -0.7782 | |
| 151 | G | B | -0.9781 | |
| 152 | T | B | -1.3098 | |
| 153 | A | B | 0.0000 | |
| 154 | D | B | -3.1042 | |
| 155 | D | B | -3.4103 | |
| 156 | Q | B | -3.0663 | |
| 157 | G | B | 0.0000 | |
| 158 | N | B | -2.4501 | |
| 159 | Y | B | 0.0000 | |
| 160 | T | B | -1.0686 | |
| 161 | I | B | 0.0000 | |
| 162 | D | B | -2.1363 | |
| 163 | I | B | -1.4574 | |
| 164 | P | B | -1.2672 | |
| 165 | S | B | -1.3265 | |
| 166 | N | B | -1.6945 | |
| 167 | V | B | -1.5360 | |
| 168 | D | B | -2.3665 | |
| 169 | L | B | 0.0000 | |
| 170 | N | B | -0.9962 | |
| 171 | G | B | 0.0251 | |
| 172 | G | B | 0.0000 | |
| 173 | E | B | 0.0000 | |
| 174 | E | B | 0.0000 | |
| 175 | L | B | 0.0000 | |
| 176 | Q | B | 0.0000 | |
| 177 | V | B | 0.0000 | |
| 178 | T | B | -1.0904 | |
| 179 | A | B | 0.0000 | |
| 180 | T | B | -1.8660 | |
| 181 | D | B | -2.2766 | |
| 182 | K | B | -3.0774 | |
| 183 | D | B | -3.0748 | |
| 184 | G | B | -2.0572 | |
| 185 | N | B | -1.7467 | |
| 186 | T | B | -1.7422 | |
| 187 | S | B | 0.0000 | |
| 188 | E | B | -2.6195 | |
| 189 | S | B | -1.5971 | |
| 190 | T | B | -0.8926 | |
| 191 | N | B | -0.7921 | |
| 192 | T | B | -0.6170 | |
| 193 | T | B | -0.1096 | |
| 194 | I | B | 0.0000 | |
| 195 | I | B | 1.2451 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine