Project name: b54ebb03d9c5177

Status: done

Started: 2024-04-30 07:56:27
Settings
Chain sequence(s) A: SLWGEHILALKNLKLDKMVGWLLQQSAATLLANRLTEKCCVETKMKMLFLANLECETLCQAALLLCSWRAAL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:02)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:02)
Show buried residues

Minimal score value
-2.6526
Maximal score value
2.4793
Average score
-0.2116
Total score value
-15.233

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A -0.1532
2 L A 1.0719
3 W A 0.2415
4 G A 0.0000
5 E A -1.7650
6 H A -1.6312
7 I A 0.0000
8 L A -1.1077
9 A A -1.0456
10 L A -1.2563
11 K A -2.1118
12 N A -2.1420
13 L A -1.4805
14 K A -2.5076
15 L A -1.0379
16 D A -2.3647
17 K A -1.9912
18 M A 0.0000
19 V A -0.1731
20 G A -0.5814
21 W A -0.2707
22 L A 0.0000
23 L A 0.9044
24 Q A -0.4100
25 Q A 0.0810
26 S A 0.4961
27 A A 0.3777
28 A A 0.2831
29 T A 0.0000
30 L A 0.4125
31 L A 0.8189
32 A A -0.2444
33 N A -1.4639
34 R A -1.5095
35 L A 0.1333
36 T A -1.2471
37 E A -2.6526
38 K A -2.2258
39 C A -1.2072
40 C A 0.0400
41 V A 0.8528
42 E A -0.2080
43 T A -0.5166
44 K A -0.7403
45 M A 0.3569
46 K A 0.1184
47 M A 0.3561
48 L A 1.0043
49 F A 0.8866
50 L A 0.5866
51 A A 0.1970
52 N A -0.6390
53 L A -0.3388
54 E A -1.4556
55 C A -0.7926
56 E A -2.0345
57 T A -1.1537
58 L A -0.1680
59 C A -0.0683
60 Q A -0.4075
61 A A 0.5166
62 A A 0.0000
63 L A 2.3554
64 L A 2.4793
65 L A 1.7025
66 C A 0.9866
67 S A 1.7285
68 W A 2.1939
69 R A 0.9244
70 A A 0.8338
71 A A 1.1576
72 L A 1.7726
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018