Chain sequence(s) |
A: SAVKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | SA5A,VR7A |
Energy difference between WT (input) and mutated protein (by FoldX) | 3.34673 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:17) [INFO] FoldX: Starting FoldX energy minimalization (00:00:19) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:33) [INFO] Main: Simulation completed successfully. (00:00:34) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
5 | A | A | -1.4095 | mutated: SA5A |
6 | A | A | -1.2492 | |
7 | R | A | -1.5212 | mutated: VR7A |
8 | K | A | -1.4598 | |
9 | A | A | 0.0000 | |
10 | L | A | -0.8434 | |
11 | F | A | -0.6826 | |
12 | D | A | -2.2491 | |
13 | Y | A | 0.0000 | |
14 | K | A | -2.5614 | |
15 | A | A | -2.4622 | |
16 | Q | A | -3.0739 | |
17 | R | A | -3.7755 | |
18 | E | A | -3.3459 | |
19 | D | A | -2.7205 | |
20 | E | A | 0.0000 | |
21 | L | A | 0.0000 | |
22 | T | A | -1.2412 | |
23 | F | A | 0.0000 | |
24 | T | A | -1.5372 | |
25 | K | A | -1.7824 | |
26 | S | A | -1.0058 | |
27 | A | A | 0.0000 | |
28 | I | A | 0.7347 | |
29 | I | A | 0.0000 | |
30 | Q | A | -1.5622 | |
31 | N | A | -2.5629 | |
32 | V | A | -2.3081 | |
33 | E | A | -3.0337 | |
34 | K | A | -3.2800 | |
35 | Q | A | -2.6419 | |
36 | D | A | -2.5722 | |
37 | G | A | -1.6797 | |
38 | G | A | -1.3364 | |
39 | W | A | -0.9905 | |
40 | W | A | -1.5971 | |
41 | R | A | -1.8890 | |
42 | G | A | 0.0000 | |
43 | D | A | -1.7725 | |
44 | Y | A | -0.7279 | |
45 | G | A | -0.8150 | |
46 | G | A | -1.3495 | |
47 | K | A | -1.8851 | |
48 | K | A | -2.6696 | |
49 | Q | A | -1.9781 | |
50 | L | A | -1.2260 | |
51 | W | A | -0.8782 | |
52 | F | A | 0.0000 | |
53 | P | A | 0.0000 | |
54 | S | A | -1.3234 | |
55 | N | A | -1.2389 | |
56 | Y | A | -0.8939 | |
57 | V | A | 0.0000 | |
58 | E | A | -2.9169 | |
59 | E | A | -2.7677 |