Project name: Ins_Chain_B

Status: done

Started: 2023-09-27 05:42:39
Settings
Chain sequence(s) B: FVNQHLCGSHLVVEALYLVCGERRGFFYTPKA
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:06)
[CRITICAL]   pyMol:    Pymol encountered an error: /bin/sh: pymol: command not found Movie         
                       creation failed.                                                            (00:00:06)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:07)
Show buried residues

Minimal score value
-2.4021
Maximal score value
2.8569
Average score
0.1624
Total score value
4.8723

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F B 1.5506
2 V B 1.1087
3 N B -0.9146
4 Q B -1.3345
5 H B -1.1855
6 L B -0.2192
7 C B 0.0860
8 G B -0.1257
9 S B -0.6729
10 H B -0.6471
11 L B 0.2807
12 V B 0.9012
13 E B -0.3078
14 A B 0.0000
15 L B 2.0967
16 Y B 1.7273
17 L B 2.1263
18 V B 2.0397
19 C B 0.5702
20 G B -0.6305
21 E B -2.3922
22 R B -2.4021
23 G B -0.2316
24 F B 1.7799
25 F B 2.8569
26 Y B 1.7766
27 T B 0.2203
28 P B -0.6614
29 K B -1.7363
30 A B -0.7874
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Laboratory of Theory of Biopolymers 2018