Project name: A33 [mutate: ND386B, ND387B, ND381B, QE383B, ND386D, ND387D, QE383D, ND381D, QE175B, QE308B, QE175D, QE308D]

Status: done

Started: 2020-02-10 09:45:39
Settings
Chain sequence(s) A: DIQMTQSPSSLSASVGDRVTITCKASQNVRTVVAWYQQKPGKAPKTLIYLASNRHTGVPSRFSGSGSGTDFTLTISSLQPEDFATYFCLQHWSYPLTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
C: DIQMTQSPSSLSASVGDRVTITCKASQNVRTVVAWYQQKPGKAPKTLIYLASNRHTGVPSRFSGSGSGTDFTLTISSLQPEDFATYFCLQHWSYPLTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
B: EVQLVESGGGLVQPGGSLRLSCAASGFAFSTYDMSWVRQAPGKGLEWVATISSGGSYTYYLDSVKGRFTISRDSSKNTLYLQMNSLRAEDTAVYYCAPTTVVPFAYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPPCPPCPAPEFLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSQEDPEVQFNWYVDGVEVHNAKTKPREEQFNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKGLPSSIEKTISKAKGQPREPQVYTLPPSQEEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSRLTVDKSRWQEGNVFSCSVMHEALHNHYTQKSLSLS
D: EVQLVESGGGLVQPGGSLRLSCAASGFAFSTYDMSWVRQAPGKGLEWVATISSGGSYTYYLDSVKGRFTISRDSSKNTLYLQMNSLRAEDTAVYYCAPTTVVPFAYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPPCPPCPAPEFLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSQEDPEVQFNWYVDGVEVHNAKTKPREEQFNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKGLPSSIEKTISKAKGQPREPQVYTLPPSQEEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSRLTVDKSRWQEGNVFSCSVMHEALHNHYTQKSLSLS
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode Yes
Automated mutations No
Mutated residues ND381B,QE383B,ND387B,ND386B,QE175B,QE308B,QE175D,QE383D,ND381D,QE308D,ND387D,ND386D
Energy difference between WT (input) and mutated protein (by FoldX) 3.51285 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:04)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:04)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:04)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:04)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:05)
[INFO]       FoldX:    Building mutant model                                                       (00:00:06)
[CRITICAL]   FoldX:    FoldX encountered an error: FoldX didn't produce expected mutant file.      
                       Can't continue without it. This is unexpected and could indicate FoldX      
                       issues.                                                                     (00:00:06)
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:44:42)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:48:52)
[INFO]       CABS:     Running CABS flex simulation                                                (01:08:02)
[INFO]       Analysis: Starting Aggrescan3D on model_10.pdb                                        (13:24:04)
[INFO]       Analysis: Starting Aggrescan3D on model_7.pdb                                         (13:24:52)
[INFO]       Analysis: Starting Aggrescan3D on model_9.pdb                                         (13:25:34)
[INFO]       Analysis: Starting Aggrescan3D on model_8.pdb                                         (13:26:17)
[INFO]       Analysis: Starting Aggrescan3D on model_11.pdb                                        (13:27:00)
[INFO]       Analysis: Starting Aggrescan3D on model_6.pdb                                         (13:27:41)
[INFO]       Analysis: Starting Aggrescan3D on model_4.pdb                                         (13:28:21)
[INFO]       Analysis: Starting Aggrescan3D on model_2.pdb                                         (13:29:04)
[INFO]       Analysis: Starting Aggrescan3D on model_5.pdb                                         (13:29:46)
[INFO]       Analysis: Starting Aggrescan3D on model_1.pdb                                         (13:30:26)
[INFO]       Analysis: Starting Aggrescan3D on model_0.pdb                                         (13:31:07)
[INFO]       Analysis: Starting Aggrescan3D on model_3.pdb                                         (13:31:49)
[INFO]       Analysis: Starting Aggrescan3D on input.pdb                                           (13:32:30)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (13:33:46)
[INFO]       Movie:    Creting movie with webm format                                              (13:48:53)
[INFO]       Main:     Simulation completed successfully.                                          (13:49:44)
Show buried residues

Minimal score value
-4.1483
Maximal score value
2.4784
Average score
-0.5802
Total score value
-760.0352

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.1537
2 I A 0.0000
3 Q A -1.7279
4 M A 0.0000
5 T A -1.0626
6 Q A 0.0000
7 S A -0.5383
8 P A -0.4110
9 S A -0.4966
10 S A -0.5770
11 L A -0.3409
12 S A -0.5147
13 A A 0.0000
14 S A -1.2934
15 V A -0.9190
16 G A -1.5616
17 D A -2.4931
18 R A -2.3962
19 V A 0.0000
20 T A -0.6519
21 I A 0.0000
22 T A -0.4050
23 C A 0.0000
24 K A -1.3943
25 A A -0.8484
26 S A -1.1929
27 Q A -1.7526
28 N A -0.5504
29 V A 1.4472
30 R A 0.9108
31 T A 0.6420
32 V A 0.8640
33 V A 0.8530
34 A A 0.0000
35 W A 0.0000
36 Y A 0.0000
37 Q A 0.0000
38 Q A 0.0000
39 K A -1.6260
40 P A -1.5220
41 G A -1.4999
42 K A -1.4766
43 A A 0.0000
44 P A -0.7176
45 K A -0.7141
46 T A 0.0000
47 L A 0.0000
48 I A 1.0405
49 Y A 0.0000
50 L A 0.6974
51 A A -0.2181
52 S A -0.7983
53 N A -1.7205
54 R A -2.1097
55 H A -1.7043
56 T A -0.7156
57 G A -0.4131
58 V A 0.0267
59 P A -0.2342
60 S A -0.2837
61 R A -0.1445
62 F A 0.8228
63 S A 0.1118
64 G A -0.2514
65 S A -0.5332
66 G A -0.8179
67 S A -0.7909
68 G A -0.8919
69 T A -0.6577
70 D A -0.9958
71 F A -0.2741
72 T A -0.3856
73 L A 0.0000
74 T A -0.2453
75 I A 0.0000
76 S A -0.7997
77 S A -0.7410
78 L A -0.8501
79 Q A -0.9528
80 P A -1.2474
81 E A -1.5535
82 D A -1.9593
83 F A 0.0000
84 A A 0.0000
85 T A 0.0000
86 Y A 0.0000
87 F A 0.0000
88 C A 0.0000
89 L A 0.0000
90 Q A 0.0000
91 H A 0.0000
92 W A 1.1336
93 S A 0.5653
94 Y A 0.0000
95 P A 0.4821
96 L A 0.0000
97 T A -0.7195
98 F A 0.0000
99 G A -1.3952
100 Q A -1.2910
101 G A -1.4479
102 T A 0.0000
103 K A -1.1885
104 V A 0.0000
105 E A -0.8044
106 I A 0.0000
107 K A -1.7431
108 R A -1.9110
109 T A -0.3887
110 V A 1.5210
111 A A 0.4906
112 A A 0.2053
113 P A 0.0000
114 S A -0.1524
115 V A 0.0361
116 F A 0.0000
117 I A 0.0000
118 F A 0.0000
119 P A 0.0000
120 P A 0.0000
121 S A -1.4230
122 D A -2.2793
123 E A -2.4200
124 Q A -0.9940
125 L A 0.4616
126 K A 0.0789
127 S A -0.3148
128 G A -0.8340
129 T A -0.7641
130 A A 0.0000
131 S A 0.0000
132 V A 0.0000
133 V A 0.0000
134 C A 0.0000
135 L A 0.0000
136 L A 0.0000
137 N A 0.0000
138 N A -0.2226
139 F A 0.0000
140 Y A -1.0206
141 P A -0.8067
142 R A -1.5568
143 E A -2.0486
144 A A 0.0000
145 K A -2.6822
146 V A 0.0000
147 Q A -1.8612
148 W A -0.9284
149 K A -1.4108
150 V A -1.5428
151 D A -2.6956
152 N A -1.9318
153 A A 0.0000
154 L A 0.6959
155 Q A -0.0509
156 S A -0.0606
157 G A -0.4650
158 N A 0.0000
159 S A -0.6421
160 Q A -1.3417
161 E A -1.9871
162 S A 0.0000
163 V A 0.6458
164 T A 0.0000
165 E A -0.6826
166 Q A -1.5502
167 D A -2.8519
168 S A -1.8660
169 K A -2.3255
170 D A -3.1418
171 S A 0.0000
172 T A 0.0000
173 Y A 0.0000
174 S A 0.0000
175 L A 0.0000
176 S A 0.0000
177 S A 0.0000
178 T A 0.0000
179 L A 0.0000
180 T A 0.0000
181 L A 0.0000
182 S A -1.6213
183 K A -2.5986
184 A A -1.9206
185 D A -2.5187
186 Y A 0.0000
187 E A -3.5341
188 K A -3.7357
189 H A 0.0000
190 K A -3.1738
191 V A -1.9016
192 Y A 0.0000
193 A A -0.9525
194 C A 0.0000
195 E A -1.0794
196 V A 0.0000
197 T A -1.4019
198 H A -1.3150
199 Q A -1.5572
200 G A -0.5353
201 L A 0.9222
202 S A -0.0423
203 S A -0.4548
204 P A -0.7529
205 V A 0.0900
206 T A -0.0700
207 K A 0.0000
208 S A -0.6974
209 F A 0.0000
210 N A -2.4257
211 R A -2.3375
212 G A -2.1195
213 E A -2.1681
214 C A -1.1478
1 D C -2.9697
2 I C 0.0000
3 Q C -2.5491
4 M C 0.0000
5 T C -1.1416
6 Q C 0.0000
7 S C -0.7389
8 P C -0.4503
9 S C -0.5828
10 S C -0.5526
11 L C -0.3313
12 S C -0.7687
13 A C 0.0000
14 S C -1.5623
15 V C -1.4915
16 G C -1.8544
17 D C -2.8030
18 R C -2.9343
19 V C 0.0000
20 T C -0.8292
21 I C 0.0000
22 T C -0.9504
23 C C 0.0000
24 K C -2.7957
25 A C 0.0000
26 S C -2.5966
27 Q C -3.1452
28 N C -2.7267
29 V C -2.2908
30 R C -2.6276
31 T C -1.5425
32 V C 0.0278
33 V C 0.0000
34 A C 0.0000
35 W C 0.0000
36 Y C 0.0000
37 Q C 0.0000
38 Q C 0.0000
39 K C -2.0067
40 P C -1.4709
41 G C -1.7558
42 K C -2.4116
43 A C 0.0000
44 P C 0.0000
45 K C -0.9161
46 T C 0.0000
47 L C 0.0000
48 I C 0.0000
49 Y C 0.0000
50 L C -0.5231
51 A C -0.3249
52 S C -0.9315
53 N C -2.1888
54 R C -3.0723
55 H C -2.1191
56 T C 0.0000
57 G C -0.5082
58 V C 0.9905
59 P C 0.3049
60 S C -0.5940
61 R C -0.8022
62 F C 0.0000
63 S C -0.5894
64 G C -0.5904
65 S C -0.8130
66 G C -1.4122
67 S C -1.2629
68 G C -1.4673
69 T C -1.9272
70 D C -2.6723
71 F C -1.6232
72 T C -1.0613
73 L C 0.0000
74 T C -0.6370
75 I C 0.0000
76 S C -1.4073
77 S C -1.5601
78 L C 0.0000
79 Q C -1.9346
80 P C -1.6174
81 E C -2.4329
82 D C 0.0000
83 F C 0.0000
84 A C -1.0827
85 T C 0.0000
86 Y C 0.0000
87 F C 0.0000
88 C C 0.0000
89 L C 0.0000
90 Q C 0.0000
91 H C 0.0000
92 W C 0.8658
93 S C -0.3530
94 Y C 0.0000
95 P C -0.3945
96 L C 0.0000
97 T C -0.6438
98 F C 0.0000
99 G C -0.9839
100 Q C -0.6238
101 G C -0.8247
102 T C 0.0000
103 K C -0.9997
104 V C 0.0000
105 E C 0.0000
106 I C -0.7088
107 K C -1.4875
108 R C -2.1137
109 T C -0.6373
110 V C 0.0997
111 A C 0.1118
112 A C -0.3311
113 P C -0.4633
114 S C 0.0000
115 V C 0.0000
116 F C 0.0000
117 I C 0.0000
118 F C 0.0000
119 P C 0.0000
120 P C 0.0000
121 S C 0.0000
122 D C -1.8694
123 E C -2.5293
124 Q C 0.0000
125 L C -1.6020
126 K C -2.5318
127 S C -1.7533
128 G C -1.4228
129 T C -0.9942
130 A C 0.0000
131 S C 0.0000
132 V C 0.0000
133 V C 0.0000
134 C C 0.0000
135 L C 0.0000
136 L C 0.0000
137 N C 0.0000
138 N C -1.0668
139 F C 0.0000
140 Y C 0.0000
141 P C -1.0013
142 R C -1.1648
143 E C -1.8706
144 A C 0.0000
145 K C -2.5057
146 V C -1.6006
147 Q C -1.4996
148 W C -0.9755
149 K C -1.2671
150 V C -1.0099
151 D C -2.3083
152 N C -2.7389
153 A C -2.0297
154 L C 0.0000
155 Q C -1.5919
156 S C 0.0000
157 G C -1.0973
158 N C -1.3399
159 S C -1.1760
160 Q C 0.0000
161 E C -1.9625
162 S C 0.0000
163 V C -0.4930
164 T C 0.0000
165 E C -1.0820
166 Q C -1.5189
167 D C -1.4019
168 S C -1.3921
169 K C -2.3814
170 D C -2.8533
171 S C 0.0000
172 T C 0.0000
173 Y C 0.0000
174 S C 0.0000
175 L C 0.0000
176 S C 0.0000
177 S C 0.0000
178 T C 0.0000
179 L C 0.0000
180 T C -0.5314
181 L C -0.9019
182 S C -1.2050
183 K C -2.0384
184 A C -1.6436
185 D C -2.6583
186 Y C 0.0000
187 E C -2.4310
188 K C -3.0552
189 H C 0.0000
190 K C -1.9012
191 V C 0.0000
192 Y C 0.0000
193 A C -0.7894
194 C C 0.0000
195 E C -1.1355
196 V C 0.0000
197 T C -1.4705
198 H C -1.5548
199 Q C -1.8459
200 G C -1.0147
201 L C -0.2427
202 S C -0.6825
203 S C -0.5016
204 P C -0.6545
205 V C -0.2023
206 T C -0.5558
207 K C 0.0000
208 S C 0.0000
209 F C 0.0000
210 N C -0.8044
211 R C -1.1416
212 G C -0.5628
213 E C 0.0000
214 C C 0.0000
1 E B -2.2867
2 V B -0.9352
3 Q B -0.7187
4 L B 0.0000
5 V B 1.1559
6 E B 0.0818
7 S B -0.1660
8 G B -0.5935
9 G B -0.6758
10 G B 0.1245
11 L B 1.1243
12 V B 1.5845
13 Q B 0.2048
14 P B -0.3910
15 G B -0.4980
16 G B -0.1812
17 S B -0.7852
18 L B 0.0000
19 R B -2.0467
20 L B 0.0000
21 S B -0.3140
22 C B 0.0000
23 A B -0.0917
24 A B -0.2649
25 S B -0.4962
26 G B -0.9962
27 F B 0.0000
28 A B -0.7000
29 F B -0.2847
30 S B -0.2325
31 T B -0.2860
32 Y B 0.0000
33 D B 0.0000
34 M B 0.0000
35 S B 0.0000
36 W B 0.0000
37 V B 0.0000
38 R B 0.0000
39 Q B 0.0000
40 A B -1.3381
41 P B -1.3273
42 G B -1.5849
43 K B -2.4357
44 G B 0.0000
45 L B 0.0000
46 E B -0.8441
47 W B 0.0000
48 V B 0.0000
49 A B 0.0000
50 T B 0.0000
51 I B 0.0000
52 S B -0.0197
53 S B -0.4537
54 G B -0.6330
55 G B -0.5678
56 S B 0.0356
57 Y B 1.2138
58 T B 0.7932
59 Y B 1.4304
60 Y B 1.3453
61 L B 0.4747
62 D B -0.0938
63 S B -0.0196
64 V B 1.2433
65 K B -0.0610
66 G B -0.2848
67 R B -0.3361
68 F B 0.0000
69 T B 0.1179
70 I B 0.0000
71 S B -0.8455
72 R B -1.8491
73 D B -2.0666
74 S B -1.4722
75 S B -1.5123
76 K B -2.2588
77 N B -1.4588
78 T B 0.0000
79 L B 0.0000
80 Y B -0.5352
81 L B 0.0000
82 Q B -1.0550
83 M B 0.0000
84 N B -0.8457
85 S B 0.0833
86 L B 1.2675
87 R B 0.0000
88 A B -0.3844
89 E B -1.1120
90 D B -2.0154
91 T B -0.7514
92 A B 0.0000
93 V B 0.0000
94 Y B 0.0000
95 Y B 0.0000
96 C B 0.0000
97 A B 0.0000
98 P B 0.0000
99 T B 0.0000
100 T B -0.5114
101 V B 0.0656
102 V B 0.0000
103 P B 0.0000
104 F B 0.0000
105 A B 0.0000
106 Y B 0.0681
107 W B 0.0000
108 G B 0.0000
109 Q B -0.9713
110 G B -0.5943
111 T B 0.0000
112 L B 0.2590
113 V B 0.0000
114 T B 0.0293
115 V B 0.0000
116 S B 0.0617
117 S B 0.1302
118 A B 0.6373
119 S B 0.6710
120 T B 0.1367
121 K B -0.6000
122 G B -1.2478
123 P B -0.2400
124 S B 0.1140
125 V B 0.0000
126 F B 0.0000
127 P B -0.9917
128 L B 0.0000
129 A B 0.0000
130 P B 0.0000
131 C B 0.0000
132 S B -1.3756
133 R B -2.3246
134 S B -1.5463
135 T B 0.0000
136 S B -1.0282
137 E B -1.5970
138 S B 0.0000
139 T B -0.7538
140 A B 0.0000
141 A B 0.0000
142 L B 0.0000
143 G B 0.0000
144 C B 0.0000
145 L B 0.0000
146 V B 0.0000
147 K B 0.0000
148 D B 0.3781
149 Y B 0.0000
150 F B 2.0699
151 P B 0.9844
152 E B 0.0000
153 P B -0.1039
154 V B 0.0000
155 T B -0.7272
156 V B 0.0000
157 S B -0.9071
158 W B -0.8299
159 N B -1.5657
160 S B -1.0686
161 G B -0.6537
162 A B -0.2841
163 L B -0.0019
164 T B -0.1111
165 S B -0.3170
166 G B 0.0000
167 V B -0.2283
168 H B 0.0000
169 T B 0.0000
170 F B 0.6163
171 P B 0.3290
172 A B 0.6468
173 V B 0.0000
174 L B 0.8254
175 E B 0.0000 mutated: QE175B
176 S B -0.2160
177 S B 0.1548
178 G B 0.8644
179 L B 1.8584
180 Y B 0.0000
181 S B 0.0000
182 L B 0.0000
183 S B 0.1149
184 S B 0.0000
185 V B 0.0000
186 V B 0.3230
187 T B 0.0000
188 V B 0.0000
189 P B -0.4464
190 S B -0.5295
191 S B -0.4222
192 S B -0.3212
193 L B -0.3960
194 G B -0.7699
195 T B -0.7397
196 K B -1.1179
197 T B 0.0000
198 Y B 0.0000
199 T B -1.6449
200 C B 0.0000
201 N B -2.1081
202 V B 0.0000
203 D B -2.6162
204 H B 0.0000
205 K B -2.6754
206 P B -1.5330
207 S B -1.6848
208 N B -2.5557
209 T B -2.2503
210 K B -2.9912
211 V B -1.9449
212 D B -2.6993
213 K B -1.9869
214 R B -1.8889
215 V B 0.0000
216 E B 0.0000
217 S B 0.0000
218 K B 0.0000
219 Y B -0.4569
220 G B -0.0709
221 P B 0.0000
222 P B 0.0000
223 C B 0.0000
224 P B -0.6526
225 P B 0.0000
226 C B 0.1331
227 P B 0.0000
228 A B -0.0711
229 P B -0.0267
230 E B 0.0000
231 F B 0.0000
232 L B 0.0000
233 G B -0.1864
234 G B 0.0000
235 P B 0.0000
236 S B 0.5468
237 V B 1.4196
238 F B 2.4784
239 L B 0.0000
240 F B 1.6974
241 P B 0.0000
242 P B -0.8847
243 K B -2.3412
244 P B -2.3980
245 K B -3.0402
246 D B -2.9861
247 T B 0.0000
248 L B 1.3368
249 M B 1.7035
250 I B 2.2456
251 S B 0.0000
252 R B -1.6268
253 T B -0.7508
254 P B 0.0000
255 E B -1.4676
256 V B 0.0000
257 T B 0.4980
258 C B 0.0000
259 V B 1.5248
260 V B 0.0000
261 V B 1.7504
262 D B 0.0000
263 V B 0.6411
264 S B 0.0000
265 Q B -0.8503
266 E B -1.6791
267 D B -1.6957
268 P B -1.8064
269 E B -2.4009
270 V B 0.0000
271 Q B -1.1622
272 F B 0.0000
273 N B -1.0694
274 W B 0.0000
275 Y B -0.5868
276 V B 0.0000
277 D B -1.3851
278 G B -0.7632
279 V B -0.3433
280 E B -1.4569
281 V B -1.2159
282 H B -1.6978
283 N B -1.2941
284 A B 0.0000
285 K B -1.9129
286 T B -1.4064
287 K B -1.8066
288 P B -2.1936
289 R B -2.3863
290 E B -3.0889
291 E B -2.2868
292 Q B -1.7660
293 F B 0.0141
294 N B -1.6915
295 S B -1.2579
296 T B 0.0000
297 Y B 0.0000
298 R B -0.9377
299 V B 0.0000
300 V B -0.6432
301 S B 0.0000
302 V B -0.4449
303 L B 0.0000
304 T B -0.5511
305 V B 0.0000
306 L B 0.2970
307 H B -0.0485
308 E B -1.3656 mutated: QE308B
309 D B -0.3858
310 W B 0.0000
311 L B 1.7058
312 N B -0.0298
313 G B 0.0000
314 K B -1.2439
315 E B -2.1119
316 Y B 0.0000
317 K B -1.2917
318 C B 0.0000
319 K B -0.6734
320 V B 0.0000
321 S B 0.0000
322 N B 0.0000
323 K B -1.2809
324 G B -1.0376
325 L B -0.1075
326 P B 0.0000
327 S B 0.0000
328 S B -0.8234
329 I B 0.0000
330 E B -1.3017
331 K B -0.9525
332 T B -0.7292
333 I B 0.0000
334 S B -1.9172
335 K B 0.0000
336 A B -1.3561
337 K B -0.3738
338 G B -0.3169
339 Q B -1.1480
340 P B -1.8803
341 R B -2.8713
342 E B -2.7252
343 P B 0.0000
344 Q B -1.3443
345 V B -0.4334
346 Y B 0.0000
347 T B -0.1109
348 L B 0.0000
349 P B 0.0000
350 P B -0.6695
351 S B -0.6470
352 Q B 0.0000
353 E B -2.2761
354 E B -1.4972
355 M B -0.5636
356 T B -1.3850
357 K B -2.7255
358 N B -2.5304
359 Q B 0.0000
360 V B 0.0000
361 S B 0.0000
362 L B 0.0000
363 T B 0.0000
364 C B 0.0000
365 L B 0.0000
366 V B 0.0000
367 K B 0.0000
368 G B -0.5486
369 F B 0.0000
370 Y B 0.0000
371 P B -0.5302
372 S B 0.0000
373 D B -1.2295
374 I B 0.2384
375 A B 0.2634
376 V B 0.0387
377 E B -1.4016
378 W B 0.0000
379 E B -2.6483
380 S B -2.5443
381 D B -3.0877 mutated: ND381B
382 G B -2.5270
383 E B 0.0000 mutated: QE383B
384 P B -2.4355
385 E B -3.0099
386 D B 0.0000 mutated: ND386B
387 D B -1.0376 mutated: ND387B
388 Y B -0.3882
389 K B -0.7230
390 T B -0.3310
391 T B 0.0000
392 P B 0.0764
393 P B 0.0766
394 V B 0.0000
395 L B 1.4149
396 D B 0.0000
397 S B -0.3735
398 D B 0.0000
399 G B 0.0000
400 S B -0.0813
401 F B 0.7364
402 F B 0.0000
403 L B 0.0000
404 Y B 0.0000
405 S B 0.0000
406 R B 0.0000
407 L B 0.0000
408 T B 0.0000
409 V B 0.0000
410 D B -2.1226
411 K B -2.5935
412 S B -1.9732
413 R B -2.8280
414 W B -2.3391
415 Q B -2.6610
416 E B -3.4709
417 G B -2.6925
418 N B -1.9868
419 V B -0.7131
420 F B 0.0000
421 S B -1.4250
422 C B 0.0000
423 S B 0.0000
424 V B 0.0000
425 M B 0.5810
426 H B 0.0000
427 E B -0.2735
428 A B 0.2515
429 L B 0.7319
430 H B -0.4565
431 N B -0.9443
432 H B 0.0000
433 Y B 0.2566
434 T B 0.0000
435 Q B -1.2645
436 K B 0.0000
437 S B -0.4136
438 L B 0.0000
439 S B -0.2999
440 L B 0.0000
441 S B -0.9036
1 E D -2.2483
2 V D 0.0000
3 Q D -1.6495
4 L D 0.0000
5 V D -0.6933
6 E D -1.7672
7 S D -0.9689
8 G D -0.8588
9 G D -0.2078
10 G D 0.5588
11 L D 1.5275
12 V D 1.2038
13 Q D -0.3741
14 P D -0.5150
15 G D -0.6191
16 G D -0.7236
17 S D -0.5199
18 L D 0.0000
19 R D -0.1124
20 L D 0.0000
21 S D -0.4167
22 C D 0.0000
23 A D -0.6826
24 A D 0.0000
25 S D -0.8843
26 G D -0.7286
27 F D -0.2980
28 A D 0.7112
29 F D 0.8599
30 S D 0.4402
31 T D 0.8911
32 Y D 0.0000
33 D D 0.0000
34 M D 0.0000
35 S D 0.0000
36 W D 0.0000
37 V D 0.0000
38 R D -0.5026
39 Q D 0.0000
40 A D -0.7331
41 P D -1.1001
42 G D -1.2012
43 K D 0.0000
44 G D -0.6792
45 L D -0.7091
46 E D -1.0577
47 W D 0.0000
48 V D 0.0000
49 A D 0.0000
50 T D 0.0000
51 I D 0.0000
52 S D 0.2841
53 S D -0.1139
54 G D -0.2597
55 G D -0.0055
56 S D 0.8927
57 Y D 1.3901
58 T D 0.0000
59 Y D 2.1997
60 Y D 1.8673
61 L D 1.7284
62 D D 0.2369
63 S D -0.6821
64 V D -1.7139
65 K D -2.7964
66 G D -2.3270
67 R D -2.6433
68 F D -1.1183
69 T D -0.4342
70 I D 0.0847
71 S D -0.4757
72 R D -1.1249
73 D D -1.9682
74 S D -1.4446
75 S D -1.2826
76 K D -2.0705
77 N D 0.0000
78 T D -1.0737
79 L D 0.0000
80 Y D 0.1115
81 L D 0.0000
82 Q D -0.6242
83 M D 0.0000
84 N D -2.0423
85 S D -2.2305
86 L D 0.0000
87 R D -2.6275
88 A D -1.8698
89 E D -2.1215
90 D D -2.2592
91 T D -1.4148
92 A D -0.7183
93 V D -0.2450
94 Y D 0.0000
95 Y D 0.0000
96 C D 0.0000
97 A D 0.0000
98 P D 0.0000
99 T D 0.0000
100 T D 0.8620
101 V D 2.0308
102 V D 0.7501
103 P D 0.0000
104 F D 0.0000
105 A D 0.0000
106 Y D 0.0000
107 W D -0.4173
108 G D -0.9432
109 Q D 0.0000
110 G D -1.1580
111 T D 0.0000
112 L D 0.5171
113 V D 0.0000
114 T D 0.0000
115 V D -0.6415
116 S D -0.6225
117 S D -0.4103
118 A D -0.3590
119 S D -0.4080
120 T D -1.0827
121 K D -1.3727
122 G D -1.2387
123 P D -0.7533
124 S D -0.3050
125 V D -0.4449
126 F D 0.0000
127 P D 0.0000
128 L D 0.0000
129 A D 0.0000
130 P D 0.0000
131 C D 0.0000
132 S D -0.3343
133 R D 0.0000
134 S D -1.0277
135 T D -0.7164
136 S D -0.7418
137 E D -1.3427
138 S D -1.0218
139 T D 0.0000
140 A D 0.0087
141 A D 0.0000
142 L D 0.0000
143 G D 0.0000
144 C D 0.0000
145 L D 0.0000
146 V D 0.0000
147 K D 0.1194
148 D D 0.1626
149 Y D 0.0000
150 F D 0.6988
151 P D 0.0000
152 E D -0.8480
153 P D -0.6937
154 V D 0.0000
155 T D -0.8469
156 V D 0.0000
157 S D -0.7681
158 W D 0.0000
159 N D -1.2952
160 S D 0.0000
161 G D -0.9179
162 A D -0.4140
163 L D 0.0000
164 T D -0.0971
165 S D -0.1207
166 G D 0.0000
167 V D 0.4140
168 H D 0.0000
169 T D -0.0736
170 F D 0.0000
171 P D -0.3172
172 A D -0.0388
173 V D 0.1170
174 L D 0.6394
175 E D 0.2805 mutated: QE175D
176 S D -0.1155
177 S D 0.0009
178 G D 0.3464
179 L D 1.4272
180 Y D 0.0000
181 S D 0.0000
182 L D 0.0000
183 S D 0.0000
184 S D 0.0000
185 V D 0.0000
186 V D 0.0000
187 T D 0.0000
188 V D 0.0000
189 P D -0.2270
190 S D -0.2723
191 S D 0.2123
192 S D 0.3285
193 L D 1.0005
194 G D -0.0002
195 T D -0.9066
196 K D -2.2340
197 T D 0.0000
198 Y D 0.0000
199 T D -2.0883
200 C D 0.0000
201 N D -2.0388
202 V D 0.0000
203 D D -2.2328
204 H D 0.0000
205 K D -2.2514
206 P D -1.4839
207 S D -1.4594
208 N D -2.5123
209 T D -2.3021
210 K D -2.8396
211 V D -1.7553
212 D D -2.6285
213 K D 0.0000
214 R D -2.8248
215 V D 0.0000
216 E D -2.6527
217 S D -1.7117
218 K D -0.9742
219 Y D -0.2713
220 G D -0.4459
221 P D -0.8330
222 P D -0.6800
223 C D 0.0000
224 P D 0.0000
225 P D 0.0000
226 C D 0.0000
227 P D -0.7145
228 A D 0.0000
229 P D -0.9002
230 E D -0.3543
231 F D 0.3022
232 L D 1.0197
233 G D 0.2942
234 G D -0.0611
235 P D 0.0000
236 S D -0.2180
237 V D 0.0000
238 F D 1.5189
239 L D 0.0000
240 F D 0.8949
241 P D 0.0000
242 P D -0.7906
243 K D -1.2806
244 P D -1.0577
245 K D 0.0000
246 D D -1.9968
247 T D 0.0000
248 L D 0.0000
249 M D 1.4196
250 I D 1.7720
251 S D 0.5847
252 R D -0.4120
253 T D -0.3135
254 P D 0.0000
255 E D -0.7592
256 V D 0.0000
257 T D 0.1595
258 C D 0.0000
259 V D 0.7749
260 V D 0.0000
261 V D 0.0214
262 D D -0.4760
263 V D 0.0000
264 S D -0.8405
265 Q D -2.1579
266 E D -3.2670
267 D D -3.2329
268 P D -2.8958
269 E D -3.2304
270 V D -1.7625
271 Q D -1.9262
272 F D 0.0000
273 N D -1.2982
274 W D -0.6391
275 Y D -0.6349
276 V D -0.4878
277 D D -1.4288
278 G D -0.3495
279 V D 0.7338
280 E D -1.0554
281 V D -0.4690
282 H D -1.5101
283 N D -1.6423
284 A D -1.3475
285 K D -2.2931
286 T D -2.0412
287 K D -2.7842
288 P D -2.2675
289 R D -3.2386
290 E D -3.1436
291 E D -2.4256
292 Q D -1.5822
293 F D -1.1248
294 N D -1.3069
295 S D -0.9140
296 T D 0.0000
297 Y D -1.2181
298 R D -1.5012
299 V D -1.1602
300 V D -0.8538
301 S D 0.0000
302 V D -0.9072
303 L D 0.0000
304 T D -0.3382
305 V D 0.0000
306 L D 0.7176
307 H D 0.0000
308 E D -0.9626 mutated: QE308D
309 D D -1.0210
310 W D 0.0000
311 L D 0.0105
312 N D -1.5943
313 G D -1.8371
314 K D -2.2020
315 E D -2.3597
316 Y D 0.0000
317 K D -1.1899
318 C D 0.0000
319 K D -1.1528
320 V D 0.0000
321 S D -1.2527
322 N D 0.0000
323 K D -2.4593
324 G D -1.7772
325 L D -0.6520
326 P D -0.5920
327 S D -0.5067
328 S D -0.5919
329 I D -0.3349
330 E D -1.3704
331 K D -0.6581
332 T D -0.5506
333 I D -0.2390
334 S D -1.0124
335 K D -1.5665
336 A D -1.5444
337 K D -1.7364
338 G D -1.0125
339 Q D 0.0000
340 P D -0.5384
341 R D 0.0000
342 E D -2.0166
343 P D -1.2057
344 Q D -0.7228
345 V D -0.4932
346 Y D 0.0000
347 T D 0.1309
348 L D 0.0000
349 P D 0.1224
350 P D -0.4575
351 S D -0.6955
352 Q D 0.0000
353 E D -2.0458
354 E D -1.2123
355 M D -0.1801
356 T D -0.2927
357 K D -0.8128
358 N D -1.3420
359 Q D 0.0000
360 V D 0.0000
361 S D 0.0000
362 L D 0.0000
363 T D 0.0000
364 C D 0.0000
365 L D 0.0000
366 V D 0.0000
367 K D 0.0000
368 G D -0.7145
369 F D 0.0000
370 Y D 0.0000
371 P D -0.2919
372 S D -0.2440
373 D D 0.0000
374 I D -0.4663
375 A D -0.5785
376 V D 0.0000
377 E D -1.4348
378 W D 0.0000
379 E D -2.8040
380 S D -2.5848
381 D D -2.8393 mutated: ND381D
382 G D -2.9541
383 E D -3.6033 mutated: QE383D
384 P D 0.0000
385 E D -2.6884
386 D D -2.7148 mutated: ND386D
387 D D -1.8505 mutated: ND387D
388 Y D -0.3724
389 K D -0.0263
390 T D -0.0333
391 T D 0.0078
392 P D -0.2490
393 P D 0.0283
394 V D 0.0000
395 L D 1.1060
396 D D -0.0419
397 S D -1.1465
398 D D -2.1674
399 G D -1.0577
400 S D 0.0000
401 F D 0.7253
402 F D 0.0000
403 L D 0.0000
404 Y D 0.0000
405 S D 0.0000
406 R D 0.0000
407 L D 0.0000
408 T D 0.0000
409 V D 0.0000
410 D D -2.4651
411 K D -2.4225
412 S D -2.3349
413 R D -3.5321
414 W D -2.7731
415 Q D -3.5116
416 E D -4.1483
417 G D -3.0086
418 N D -2.6769
419 V D 0.0000
420 F D -0.7409
421 S D -1.2072
422 C D 0.0000
423 S D -0.9628
424 V D 0.0000
425 M D -0.7182
426 H D 0.0000
427 E D 0.0000
428 A D 0.0000
429 L D 1.1337
430 H D 0.2240
431 N D 0.5231
432 H D -0.3709
433 Y D 0.0862
434 T D -0.8546
435 Q D -1.3312
436 K D 0.0000
437 S D -0.3009
438 L D 0.0000
439 S D 0.0000
440 L D 1.0732
441 S D 0.1196
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CABS-flex predictions of flexibility of input structure

In dynamic mode, A3D analysis is performed on the set of models reflecting fluctuations of the input structure (predicted by CABS-flex method, models are numbered from 0 to 11) and the input model. Their A3D scores are provided below in the table.
The right panel presents comparison of the most aggregation prone model (with the highest A3D score, -0.5802 in this case) with the input model (the most aggregation prone model in blue, input in red) and RMSF plot which shows the extent of residue fluctuations in Angstroms (predicted by CABS-flex).

Model
Average A3D Score
model_8 -0.5802 View CSV PDB
model_0 -0.5863 View CSV PDB
model_1 -0.5907 View CSV PDB
model_5 -0.5934 View CSV PDB
model_9 -0.5982 View CSV PDB
model_3 -0.6009 View CSV PDB
model_10 -0.6029 View CSV PDB
model_4 -0.6107 View CSV PDB
model_2 -0.6124 View CSV PDB
model_7 -0.6219 View CSV PDB
model_6 -0.6233 View CSV PDB
model_11 -0.6496 View CSV PDB
input -0.7173 View CSV PDB
 

Laboratory of Theory of Biopolymers 2018