Chain sequence(s) |
A: GRETYDYAMWCGDQEGFAFEEMDKCVIAGYDGYDY
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15) [INFO] Main: Simulation completed successfully. (00:00:16) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | G | A | -1.9071 | |
2 | R | A | -3.1385 | |
3 | E | A | -3.0149 | |
4 | T | A | -1.7104 | |
5 | Y | A | -1.5941 | |
6 | D | A | -1.8721 | |
7 | Y | A | 0.1430 | |
8 | A | A | 0.0000 | |
9 | M | A | -0.1120 | |
11 | W | A | 0.3014 | |
12 | C | A | 0.0000 | |
13 | G | A | -0.9980 | |
14 | D | A | -2.4005 | |
15 | Q | A | -2.0145 | |
16 | E | A | -2.7156 | |
17 | G | A | -1.2407 | |
18 | F | A | -0.6160 | |
19 | A | A | -0.0512 | |
20 | F | A | 0.4303 | |
21 | E | A | -2.0403 | |
22 | E | A | -2.1261 | |
23 | M | A | -1.2669 | |
24 | D | A | -2.5923 | |
25 | K | A | -2.5094 | |
26 | C | A | -0.6404 | |
27 | V | A | 0.0000 | |
29 | I | A | 0.9999 | |
30 | A | A | 0.3822 | |
31 | G | A | -0.1667 | |
32 | Y | A | -0.8233 | |
33 | D | A | -1.9723 | |
34 | G | A | -1.4598 | |
35 | Y | A | -0.0962 | |
36 | D | A | -1.1456 | |
37 | Y | A | 0.4937 |