| Chain sequence(s) |
A: KVEQAVETEPEPELRQQTEWQSGQRWELALGRFWDYLRWVQTLSEQVQEELLSSQVTQELRALMDETMKELKAYKSELEEQLTPVAEETRARLSKELQAAQARLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKRLAVYQAGAREGAERGLSAIRERLGPLVEQGRVRAATVGSLAGQPLQERAQAWGERLRARMEEMGSRTRDRLDEVKEQVAEVRAKLEEQAQQIRLQAEAAQARLKSRFEPLAEDMQRQWAGQVEKVQAAEGTSAAPVPSDNH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:45)
[INFO] Main: Simulation completed successfully. (00:05:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -0.5838 | |
| 2 | V | A | -0.2304 | |
| 3 | E | A | -1.4268 | |
| 4 | Q | A | 0.0000 | |
| 5 | A | A | -0.8395 | |
| 6 | V | A | -0.9825 | |
| 7 | E | A | -1.7263 | |
| 8 | T | A | 0.0000 | |
| 9 | E | A | -2.4938 | |
| 10 | P | A | -1.5929 | |
| 11 | E | A | -1.7430 | |
| 12 | P | A | -1.6311 | |
| 13 | E | A | -1.8465 | |
| 14 | L | A | 0.0000 | |
| 15 | R | A | -1.6593 | |
| 16 | Q | A | -1.2974 | |
| 17 | Q | A | -1.1252 | |
| 18 | T | A | 0.0000 | |
| 19 | E | A | -1.9047 | |
| 20 | W | A | -0.4793 | |
| 21 | Q | A | -1.2995 | |
| 22 | S | A | -1.5776 | |
| 23 | G | A | -1.8899 | |
| 24 | Q | A | -2.5233 | |
| 25 | R | A | -2.8301 | |
| 26 | W | A | -2.0510 | |
| 27 | E | A | -2.0330 | |
| 28 | L | A | -1.5995 | |
| 29 | A | A | 0.0000 | |
| 30 | L | A | 0.0000 | |
| 31 | G | A | -1.7577 | |
| 32 | R | A | -2.3076 | |
| 33 | F | A | 0.0000 | |
| 34 | W | A | 0.0000 | |
| 35 | D | A | -1.9956 | |
| 36 | Y | A | -0.9826 | |
| 37 | L | A | 0.0000 | |
| 38 | R | A | -1.0141 | |
| 39 | W | A | -0.0537 | |
| 40 | V | A | 0.0000 | |
| 41 | Q | A | 0.0000 | |
| 42 | T | A | 0.0000 | |
| 43 | L | A | 0.0000 | |
| 44 | S | A | -1.8962 | |
| 45 | E | A | -2.4870 | |
| 46 | Q | A | -1.8754 | |
| 47 | V | A | 0.0000 | |
| 48 | Q | A | -1.2720 | |
| 49 | E | A | -1.3388 | |
| 50 | E | A | 0.0000 | |
| 51 | L | A | 0.0000 | |
| 52 | L | A | 0.0000 | |
| 53 | S | A | -0.5162 | |
| 54 | S | A | 0.0000 | |
| 55 | Q | A | -0.3747 | |
| 56 | V | A | -0.4341 | |
| 57 | T | A | 0.0000 | |
| 58 | Q | A | -0.5635 | |
| 59 | E | A | -1.4546 | |
| 60 | L | A | 0.0000 | |
| 61 | R | A | -1.6378 | |
| 62 | A | A | -1.2938 | |
| 63 | L | A | -1.6696 | |
| 64 | M | A | 0.0000 | |
| 65 | D | A | -2.9368 | |
| 66 | E | A | -2.8699 | |
| 67 | T | A | 0.0000 | |
| 68 | M | A | 0.0000 | |
| 69 | K | A | -2.8107 | |
| 70 | E | A | -2.1656 | |
| 71 | L | A | 0.0000 | |
| 72 | K | A | -1.8134 | |
| 73 | A | A | -1.1645 | |
| 74 | Y | A | -0.7840 | |
| 75 | K | A | 0.0000 | |
| 76 | S | A | -1.4655 | |
| 77 | E | A | -2.4708 | |
| 78 | L | A | 0.0000 | |
| 79 | E | A | 0.0000 | |
| 80 | E | A | -3.2058 | |
| 81 | Q | A | -2.7850 | |
| 82 | L | A | 0.0000 | |
| 83 | T | A | 0.0000 | |
| 84 | P | A | -0.8316 | |
| 85 | V | A | -0.7771 | |
| 86 | A | A | -2.5942 | |
| 87 | E | A | -3.2016 | |
| 88 | E | A | -2.9360 | |
| 89 | T | A | -1.7881 | |
| 90 | R | A | -2.1775 | |
| 91 | A | A | -1.4562 | |
| 92 | R | A | -1.5060 | |
| 93 | L | A | 0.0000 | |
| 94 | S | A | 0.0000 | |
| 95 | K | A | -1.6881 | |
| 96 | E | A | 0.0000 | |
| 97 | L | A | 0.0000 | |
| 98 | Q | A | -1.3646 | |
| 99 | A | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | Q | A | 0.0000 | |
| 102 | A | A | -0.2892 | |
| 103 | R | A | 0.0000 | |
| 104 | L | A | 0.0000 | |
| 105 | G | A | 0.0000 | |
| 106 | A | A | -0.7401 | |
| 107 | D | A | 0.0000 | |
| 108 | M | A | 0.0000 | |
| 109 | E | A | -2.1473 | |
| 110 | D | A | -1.0085 | |
| 111 | V | A | 0.0000 | |
| 112 | C | A | 0.0000 | |
| 113 | G | A | -0.6663 | |
| 114 | R | A | 0.0000 | |
| 115 | L | A | 0.0000 | |
| 116 | V | A | 0.1545 | |
| 117 | Q | A | -0.6090 | |
| 118 | Y | A | 0.0000 | |
| 119 | R | A | -0.6307 | |
| 120 | G | A | -0.6574 | |
| 121 | E | A | -0.4602 | |
| 122 | V | A | 0.0000 | |
| 123 | Q | A | -0.2769 | |
| 124 | A | A | 0.2775 | |
| 125 | M | A | 0.7016 | |
| 126 | L | A | 1.0375 | |
| 127 | G | A | -0.1867 | |
| 128 | Q | A | -1.4217 | |
| 129 | S | A | -1.4630 | |
| 130 | T | A | 0.0000 | |
| 131 | E | A | -2.2238 | |
| 132 | E | A | -2.2412 | |
| 133 | L | A | 0.0000 | |
| 134 | R | A | 0.0000 | |
| 135 | V | A | 0.0000 | |
| 136 | R | A | 0.0000 | |
| 137 | L | A | 0.0000 | |
| 138 | A | A | 0.0000 | |
| 139 | S | A | -0.6619 | |
| 140 | H | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | R | A | 0.0000 | |
| 143 | K | A | 0.0000 | |
| 144 | L | A | 0.0000 | |
| 145 | R | A | 0.0000 | |
| 146 | K | A | 0.0000 | |
| 147 | R | A | 0.0000 | |
| 148 | L | A | 0.0000 | |
| 149 | L | A | 0.0000 | |
| 150 | R | A | -0.3282 | |
| 151 | D | A | 0.0000 | |
| 152 | A | A | -0.1065 | |
| 153 | D | A | 0.0000 | |
| 154 | D | A | 0.0000 | |
| 155 | L | A | 0.0000 | |
| 156 | Q | A | 0.0000 | |
| 157 | K | A | 0.0000 | |
| 158 | R | A | 0.0000 | |
| 159 | L | A | 0.0000 | |
| 160 | A | A | -0.4912 | |
| 161 | V | A | -0.3880 | |
| 162 | Y | A | 0.0000 | |
| 163 | Q | A | -1.5406 | |
| 164 | A | A | -0.5231 | |
| 165 | G | A | -1.0853 | |
| 166 | A | A | 0.0000 | |
| 167 | R | A | -3.5231 | |
| 168 | E | A | -3.9513 | |
| 169 | G | A | 0.0000 | |
| 170 | A | A | -3.0421 | |
| 171 | E | A | -3.2634 | |
| 172 | R | A | -2.4898 | |
| 173 | G | A | 0.0000 | |
| 174 | L | A | -1.4835 | |
| 175 | S | A | -1.8250 | |
| 176 | A | A | 0.0000 | |
| 177 | I | A | -1.5626 | |
| 178 | R | A | -2.8114 | |
| 179 | E | A | -2.9907 | |
| 180 | R | A | -1.9693 | |
| 181 | L | A | -1.1086 | |
| 182 | G | A | -1.1301 | |
| 183 | P | A | -0.0979 | |
| 184 | L | A | 0.3874 | |
| 185 | V | A | -0.4761 | |
| 186 | E | A | -0.7582 | |
| 187 | Q | A | -0.8561 | |
| 188 | G | A | -1.3499 | |
| 189 | R | A | -2.4741 | |
| 190 | V | A | 0.0000 | |
| 191 | R | A | -2.3262 | |
| 192 | A | A | -0.8990 | |
| 193 | A | A | -0.5242 | |
| 194 | T | A | 0.0208 | |
| 195 | V | A | 1.7406 | |
| 196 | G | A | 1.0808 | |
| 197 | S | A | 0.0000 | |
| 198 | L | A | 1.9755 | |
| 199 | A | A | 1.0684 | |
| 200 | G | A | 0.0000 | |
| 201 | Q | A | -0.2424 | |
| 202 | P | A | -0.8229 | |
| 203 | L | A | -0.2442 | |
| 204 | Q | A | -1.9248 | |
| 205 | E | A | -3.0733 | |
| 206 | R | A | -2.9357 | |
| 207 | A | A | -1.7875 | |
| 208 | Q | A | -1.7525 | |
| 209 | A | A | -1.5366 | |
| 210 | W | A | -0.5711 | |
| 211 | G | A | -1.3060 | |
| 212 | E | A | -2.4843 | |
| 213 | R | A | -1.9795 | |
| 214 | L | A | -1.3837 | |
| 215 | R | A | -2.8911 | |
| 216 | A | A | -2.4448 | |
| 217 | R | A | 0.0000 | |
| 218 | M | A | -1.2755 | |
| 219 | E | A | -3.0023 | |
| 220 | E | A | -3.0962 | |
| 221 | M | A | -1.7922 | |
| 222 | G | A | -1.8763 | |
| 223 | S | A | -2.3430 | |
| 224 | R | A | -3.0862 | |
| 225 | T | A | 0.0000 | |
| 226 | R | A | -3.1262 | |
| 227 | D | A | 0.0000 | |
| 228 | R | A | -2.5663 | |
| 229 | L | A | 0.0000 | |
| 230 | D | A | -3.5314 | |
| 231 | E | A | -3.1534 | |
| 232 | V | A | -2.0441 | |
| 233 | K | A | -2.3898 | |
| 234 | E | A | -1.9090 | |
| 235 | Q | A | 0.0000 | |
| 236 | V | A | -0.7742 | |
| 237 | A | A | -0.6911 | |
| 238 | E | A | 0.0000 | |
| 239 | V | A | 0.0000 | |
| 240 | R | A | -2.0455 | |
| 241 | A | A | -1.1716 | |
| 242 | K | A | 0.0000 | |
| 243 | L | A | 0.0000 | |
| 244 | E | A | -1.9971 | |
| 245 | E | A | 0.0000 | |
| 246 | Q | A | -0.7775 | |
| 247 | A | A | -0.7788 | |
| 248 | Q | A | -1.4322 | |
| 249 | Q | A | -0.5811 | |
| 250 | I | A | 0.4055 | |
| 251 | R | A | -1.6178 | |
| 252 | L | A | 0.0000 | |
| 253 | Q | A | -0.9052 | |
| 254 | A | A | -1.1083 | |
| 255 | E | A | -1.7459 | |
| 256 | A | A | -1.1094 | |
| 257 | A | A | -1.1657 | |
| 258 | Q | A | -1.7665 | |
| 259 | A | A | 0.0000 | |
| 260 | R | A | 0.0000 | |
| 261 | L | A | -0.3246 | |
| 262 | K | A | -0.8382 | |
| 263 | S | A | 0.0000 | |
| 264 | R | A | 0.0000 | |
| 265 | F | A | 0.8824 | |
| 266 | E | A | 0.1272 | |
| 267 | P | A | 0.0887 | |
| 268 | L | A | 0.4023 | |
| 269 | A | A | -0.3262 | |
| 270 | E | A | -2.0140 | |
| 271 | D | A | 0.0000 | |
| 272 | M | A | -0.8261 | |
| 273 | Q | A | -2.2347 | |
| 274 | R | A | -2.5100 | |
| 275 | Q | A | 0.0000 | |
| 276 | W | A | -0.0798 | |
| 277 | A | A | -0.3527 | |
| 278 | G | A | -0.9959 | |
| 279 | Q | A | 0.0000 | |
| 280 | V | A | 0.0000 | |
| 281 | E | A | -0.8478 | |
| 282 | K | A | -0.6076 | |
| 283 | V | A | -0.3300 | |
| 284 | Q | A | -1.1071 | |
| 285 | A | A | -0.4504 | |
| 286 | A | A | -0.1692 | |
| 287 | E | A | 0.0000 | |
| 288 | G | A | -0.6785 | |
| 289 | T | A | -0.7446 | |
| 290 | S | A | -1.2901 | |
| 291 | A | A | 0.0000 | |
| 292 | A | A | -0.5046 | |
| 293 | P | A | -0.3636 | |
| 294 | V | A | -1.0561 | |
| 295 | P | A | -1.4060 | |
| 296 | S | A | -2.2399 | |
| 297 | D | A | -2.9644 | |
| 298 | N | A | -2.8133 | |
| 299 | H | A | -2.2058 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine