Chain sequence(s) |
A: AARKALFDYKAQREDELTFTKSAGIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | GQ28A |
Energy difference between WT (input) and mutated protein (by FoldX) | -0.854773 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:17) [INFO] FoldX: Starting FoldX energy minimalization (00:00:21) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:37) [INFO] Main: Simulation completed successfully. (00:00:37) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
5 | A | A | -1.3055 | |
6 | A | A | -1.9709 | |
7 | R | A | -2.5733 | |
8 | K | A | -2.9961 | |
9 | A | A | 0.0000 | |
10 | L | A | -0.9219 | |
11 | F | A | -0.7261 | |
12 | D | A | -2.2527 | |
13 | Y | A | 0.0000 | |
14 | K | A | -2.5619 | |
15 | A | A | -2.4622 | |
16 | Q | A | -3.0739 | |
17 | R | A | -3.7755 | |
18 | E | A | -3.3459 | |
19 | D | A | -2.7200 | |
20 | E | A | 0.0000 | |
21 | L | A | 0.0000 | |
22 | T | A | -1.2411 | |
23 | F | A | 0.0000 | |
24 | T | A | -1.9578 | |
25 | K | A | -2.2508 | |
26 | S | A | -1.8697 | |
27 | A | A | 0.0000 | |
28 | Q | A | -2.5619 | mutated: GQ28A |
29 | I | A | 0.0000 | |
30 | Q | A | -2.1878 | |
31 | N | A | -2.3085 | |
32 | V | A | -2.1741 | |
33 | E | A | -2.9704 | |
34 | K | A | -3.2595 | |
35 | Q | A | -2.6439 | |
36 | D | A | -2.5736 | |
37 | G | A | -1.6806 | |
38 | G | A | -1.3373 | |
39 | W | A | -0.9910 | |
40 | W | A | -1.5977 | |
41 | R | A | -1.8380 | |
42 | G | A | 0.0000 | |
43 | D | A | -2.0992 | |
44 | Y | A | -1.2853 | |
45 | G | A | -1.1543 | |
46 | G | A | -1.3492 | |
47 | K | A | -1.8848 | |
48 | K | A | -2.6253 | |
49 | Q | A | -1.9237 | |
50 | L | A | -1.2244 | |
51 | W | A | -0.8769 | |
52 | F | A | 0.0000 | |
53 | P | A | 0.0000 | |
54 | S | A | -1.3241 | |
55 | N | A | -1.2406 | |
56 | Y | A | -0.9411 | |
57 | V | A | 0.0000 | |
58 | E | A | -3.3529 | |
59 | E | A | -3.2168 |