Project name: dfc443a6e7e43e1

Status: done

Started: 2024-04-19 18:14:35
Settings
Chain sequence(s) A: ARGWDYGGGYFDY
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:04)
Show buried residues

Minimal score value
-1.2244
Maximal score value
1.6501
Average score
0.3924
Total score value
5.1013

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.6136
2 R A -1.2244
3 G A 0.2388
4 W A 1.0781
5 D A 0.4787
6 Y A 0.9317
7 G A -0.0484
8 G A -0.0909
9 G A 0.8032
10 Y A 1.6501
11 F A 1.5713
12 D A -0.3273
13 Y A 0.6540
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Laboratory of Theory of Biopolymers 2018