Chain sequence(s) |
A: ARGWDYGGGYFDY
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:03) [INFO] Main: Simulation completed successfully. (00:00:04) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | A | A | -0.6136 | |
2 | R | A | -1.2244 | |
3 | G | A | 0.2388 | |
4 | W | A | 1.0781 | |
5 | D | A | 0.4787 | |
6 | Y | A | 0.9317 | |
7 | G | A | -0.0484 | |
8 | G | A | -0.0909 | |
9 | G | A | 0.8032 | |
10 | Y | A | 1.6501 | |
11 | F | A | 1.5713 | |
12 | D | A | -0.3273 | |
13 | Y | A | 0.6540 |