| Chain sequence(s) |
C: TLSLLTKAKLHIKKLEDCDRKAVHQIDQLQREQRHLKRQLEK
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | AH8C |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.104338 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:02:12)
[INFO] FoldX: Starting FoldX energy minimalization (00:02:17)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:05)
[CRITICAL] pyMol: Pymol encountered an error: /bin/sh: pymol: command not found Movie
creation failed. (00:03:05)
[INFO] Main: Simulation completed successfully. (00:03:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | T | C | 0.2127 | |
| 2 | L | C | 1.4967 | |
| 3 | S | C | 0.3428 | |
| 4 | L | C | 1.7872 | |
| 5 | L | C | 1.8203 | |
| 6 | T | C | -0.0546 | |
| 7 | K | C | -1.8841 | |
| 8 | H | C | -1.6036 | mutated: AH8C |
| 9 | K | C | -1.7429 | |
| 10 | L | C | 0.1153 | |
| 11 | H | C | -0.4193 | |
| 12 | I | C | 1.2100 | |
| 13 | K | C | -1.6347 | |
| 14 | K | C | -1.8287 | |
| 15 | L | C | 0.4828 | |
| 16 | E | C | -1.5249 | |
| 17 | D | C | -1.3927 | |
| 18 | C | C | -0.1220 | |
| 19 | D | C | -2.1387 | |
| 20 | R | C | -2.2684 | |
| 21 | K | C | -1.9918 | |
| 22 | A | C | 0.0534 | |
| 23 | V | C | 1.6006 | |
| 24 | H | C | -0.8172 | |
| 25 | Q | C | -0.6436 | |
| 26 | I | C | 1.6757 | |
| 27 | D | C | -0.9110 | |
| 28 | Q | C | -1.1994 | |
| 29 | L | C | 0.5271 | |
| 30 | Q | C | -0.9300 | |
| 31 | R | C | -2.2599 | |
| 32 | E | C | -1.9250 | |
| 33 | Q | C | -1.2148 | |
| 34 | R | C | -1.5154 | |
| 35 | H | C | -1.0241 | |
| 36 | L | C | 0.4796 | |
| 37 | K | C | -1.5443 | |
| 38 | R | C | -2.3170 | |
| 39 | Q | C | -1.1563 | |
| 40 | L | C | 1.0059 | |
| 41 | E | C | -1.8467 | |
| 42 | K | C | -2.0271 |