Project name: scc2

Status: done

Started: 2023-09-25 15:07:16
Settings
Chain sequence(s) D: TTNCLTKLQMTIKNITLLRLLDVMVCNIKRYIALLSTIVLFNIESYIMEPVNFLSDLIESLKDTFQEALELLPKYIRNGPFLDDNVTAKLVYIFSDLLMNSFWDNVKRISSDILVSLFGSFDQQRGFIIEELLSHIEKLPTKRIQKKLRKVQNIYITDFTFTLMSMLENINCYSFCNQMNIDLLKNEYKKQEEFLFNIVEHINDTILERFFKNPSALRYVIDNFVQDLLLLISSPQWPVTEKILSSLLKRLLSVYSPSMQVSANIETICLQLIGNIGSTIFDIKCSTRDHEDNNLITLPHFFKSFEECIAYNETIKCRRSATRFLWNLRLGTILIITVDNELKKILEQIKSTIKLDYFSILHAFELLNLYDPYLKLILSLLAKDKIKLRSTAIKCLSMLASKDKVILSNPMVKETIHRRLNDSSASVKDAILDLVSINSSYFEFYQQINNNYNDDSIMVRKHVLRINEKMYDETNDIVTKVYVIARILMKIEDEEDNIIDMARLILLNRWILKVHEVLDQPEKLKEISSSVLLVMSRVAIMNEKCSQLFDLFLNFYLLNKEAHSKEAYDKITHVLTILTDFLVQKIVELNIVDKQNFLNLLAKFADSTVSFLTKDHITALYPYMVSDSDFHYYILQVFRCTFEKLANFKQKFLYDLETTLLSRLPKMNVREIDEAMPLIWSVATHRHDTARVAKACSSCLSHLHPYINKANGKLQRLIYLSTGFARFCFPKGETLYEHITKCLLVLSKDKITHVIRRVAVKNLTKLCGNHPKLFNSRHVLHLLDKEFQSDQLDIKLVILESLYDLFLLEERKSVRNTGVNSTLSSNGVCSALATRFLDNILQLCLLRDLKNSLVAIRLLKLILKFGYTNPSHSIPTVIALFASTSQYIRHVAYELLEDLFEKYETLVFSSLSRGVTKAIHYSIHTDEKYYYKHDHFLSLLEKLCGTGKKNGPKFFKVLKRIMQSYLVQKSIFVLCTNISNITFVSQYDLVSLLKTIDLTTDRLKEVIMDELSGIILIQLSLQDLGTYLLHLYESELKNKQFSAQLENIEQ
input PDB
Selected Chain(s) D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode Yes
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with D chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       CABS:     Running CABS flex simulation                                                (00:17:01)
[INFO]       Analysis: Starting Aggrescan3D on model_3.pdb                                         (03:29:12)
[INFO]       Analysis: Starting Aggrescan3D on model_7.pdb                                         (03:29:23)
[INFO]       Analysis: Starting Aggrescan3D on model_1.pdb                                         (03:29:35)
[INFO]       Analysis: Starting Aggrescan3D on model_6.pdb                                         (03:29:47)
[INFO]       Analysis: Starting Aggrescan3D on model_9.pdb                                         (03:29:58)
[INFO]       Analysis: Starting Aggrescan3D on model_8.pdb                                         (03:30:10)
[INFO]       Analysis: Starting Aggrescan3D on model_5.pdb                                         (03:30:22)
[INFO]       Analysis: Starting Aggrescan3D on model_10.pdb                                        (03:30:33)
[INFO]       Analysis: Starting Aggrescan3D on model_4.pdb                                         (03:30:45)
[INFO]       Analysis: Starting Aggrescan3D on model_11.pdb                                        (03:30:56)
[INFO]       Analysis: Starting Aggrescan3D on model_0.pdb                                         (03:31:09)
[INFO]       Analysis: Starting Aggrescan3D on model_2.pdb                                         (03:31:21)
[INFO]       Analysis: Starting Aggrescan3D on input.pdb                                           (03:31:32)
[WARNING]    CABS:     Pymol failed to launch (most likely not present on the system).Couldn't     
                       create a superimposed picture of CABS input and output                      (03:31:44)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (03:31:46)
[CRITICAL]   pyMol:    Pymol encountered an error: /bin/sh: pymol: command not found Movie         
                       creation failed.                                                            (03:31:46)
[INFO]       Main:     Simulation completed successfully.                                          (03:31:58)
Show buried residues

Minimal score value
-3.8452
Maximal score value
2.9626
Average score
-0.505
Total score value
-530.2099

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
221 T D 0.5387
222 T D 0.0000
223 N D 0.6325
224 C D 0.0000
225 L D 0.0000
226 T D 0.0000
227 K D -0.0096
228 L D 0.0000
229 Q D 0.0000
230 M D -0.1416
231 T D -0.5028
232 I D 0.0000
233 K D -0.9762
234 N D -1.4866
235 I D -0.9825
236 T D 0.0000
250 L D 0.0000
251 L D 0.0000
252 R D 0.0000
253 L D 0.0000
254 L D 0.0000
255 D D 0.0000
256 V D 0.0000
257 M D 0.0000
258 V D 0.0000
259 C D 0.0000
260 N D 0.0000
261 I D -1.1308
262 K D -1.6103
278 R D -0.8275
279 Y D 0.7311
280 I D 0.0000
281 A D 0.0000
282 L D 0.0000
283 L D 0.8247
284 S D 0.0000
285 T D 0.0000
286 I D 0.0000
287 V D 0.0000
288 L D 0.0000
289 F D 0.0000
290 N D -0.0608
291 I D 0.5429
304 E D -0.0071
305 S D 0.4235
306 Y D 1.3074
307 I D 0.0000
308 M D 0.1914
309 E D 0.2771
310 P D 0.0000
311 V D 0.0000
312 N D 0.1266
313 F D 0.7055
314 L D 0.0000
315 S D 0.0000
316 D D -0.9593
317 L D 0.0000
318 I D 0.0000
319 E D -1.4141
320 S D -1.0010
321 L D -0.7528
322 K D -1.6755
336 D D -0.7123
337 T D 0.1548
338 F D 1.3832
339 Q D 0.5517
340 E D -0.0560
341 A D 0.0000
342 L D 0.0000
343 E D 0.0000
344 L D -0.0607
345 L D 0.4735
346 P D 0.0000
347 K D -0.3504
348 Y D 0.0699
349 I D 0.0000
350 R D 0.0000
351 N D -0.5705
352 G D 0.0000
353 P D 0.0000
354 F D -0.1613
355 L D 0.1043
356 D D -0.6968
357 D D -0.5054
358 N D -0.7919
359 V D 0.0000
360 T D 0.0000
361 A D 0.0000
362 K D -0.6038
363 L D 0.0000
364 V D 0.0000
365 Y D -0.7042
366 I D 0.0000
367 F D 0.0000
368 S D 0.0000
369 D D 0.0000
370 L D 0.0000
371 L D 0.0000
372 M D -1.4102
373 N D 0.0000
386 S D 0.0000
387 F D -0.2200
388 W D 0.2597
389 D D 0.0000
390 N D 0.0000
391 V D 0.7275
392 K D 0.0000
393 R D 0.1437
394 I D 0.5857
395 S D 0.0000
396 S D 0.0000
397 D D 0.0000
398 I D 0.6570
399 L D 0.0000
400 V D 0.0000
401 S D 0.0000
402 L D 0.2394
403 F D 0.0000
404 G D -0.1730
405 S D -0.2635
406 F D -0.1853
407 D D -1.6872
408 Q D -1.6557
409 Q D -0.9792
410 R D -0.8085
411 G D -0.5095
412 F D 0.1739
413 I D 0.0000
414 I D 0.0000
415 E D -0.8989
416 E D -0.8919
417 L D 0.0000
418 L D 0.0000
419 S D -0.6449
420 H D -0.9934
421 I D 0.0000
422 E D -1.5612
423 K D -1.5011
424 L D 0.0000
425 P D 0.0000
426 T D -1.2041
427 K D -2.1587
428 R D -2.4098
429 I D 0.0000
430 Q D -2.1396
431 K D -2.2938
432 K D -1.3235
433 L D -0.5207
434 R D 0.0000
435 K D -0.3203
436 V D -0.0525
439 Q D -0.0935
440 N D -0.7117
441 I D 0.8115
442 Y D 0.0000
443 I D 0.0000
444 T D 0.0000
445 D D 0.0000
446 F D 0.0000
447 T D 0.0000
448 F D 0.0000
449 T D 0.0000
450 L D 0.0000
451 M D 0.0000
452 S D 0.0000
453 M D 0.0000
454 L D 0.0000
455 E D 0.0000
456 N D 0.0000
457 I D -0.4472
458 N D -0.8603
459 C D -0.2270
460 Y D 0.1535
461 S D 0.1838
462 F D 1.1988
463 C D 0.3883
464 N D -0.9276
465 Q D -0.9487
466 M D 0.5234
473 N D 0.5464
474 I D 1.2983
475 D D -0.5884
476 L D 0.6640
477 L D 0.0833
478 K D -1.1316
479 N D -1.8835
480 E D -2.5946
481 Y D 0.0000
482 K D -3.1409
483 K D -3.3504
484 Q D 0.0000
485 E D -2.0008
486 E D -2.3496
487 F D -0.8380
488 L D 0.0000
489 F D -0.0920
490 N D -0.8534
491 I D 0.0000
492 V D 0.0000
493 E D -1.8175
494 H D -1.6486
495 I D 0.0000
496 N D -2.1470
497 D D -2.9647
498 T D -1.8127
499 I D 0.0000
500 L D 0.0000
501 E D -2.2458
502 R D -2.4167
503 F D 0.0000
504 F D -0.4027
505 K D -2.2340
506 N D -2.3599
507 P D 0.0000
508 S D -0.8391
509 A D -0.5248
510 L D -1.0050
511 R D -1.1952
512 Y D -0.6950
513 V D 0.0000
514 I D 0.0000
515 D D -0.4831
516 N D 0.0000
517 F D 0.0000
518 V D 0.1113
519 Q D -0.0681
520 D D 0.0000
521 L D 0.0000
522 L D 0.2638
523 L D 0.1616
524 L D 0.0000
525 I D 0.0000
526 S D -0.4381
527 S D 0.0000
528 P D -0.4828
529 Q D 0.0000
530 W D 0.0000
531 P D 0.0000
532 V D 0.0000
533 T D 0.0000
534 E D 0.0000
535 K D -0.1595
536 I D 0.0000
537 L D 0.0000
538 S D 0.0000
539 S D -1.0223
540 L D 0.0000
541 L D 0.0000
542 K D -1.9587
543 R D -1.8274
544 L D 0.0000
545 L D -0.7059
546 S D -0.7546
547 V D 0.0000
548 Y D -0.4165
549 S D -0.4477
550 P D -0.4533
551 S D -0.6863
552 M D 0.0000
553 Q D -1.6045
554 V D -0.5000
555 S D -0.7154
556 A D -1.1822
557 N D -1.6688
558 I D 0.0000
559 E D 0.0000
560 T D -0.9377
561 I D -0.5452
562 C D 0.0000
563 L D 0.0000
564 Q D -0.7780
565 L D 0.0000
566 I D 0.0000
567 G D 0.0000
568 N D -0.2667
569 I D -0.0106
570 G D 0.0000
571 S D 0.0000
572 T D -0.1758
573 I D 0.0000
574 F D 0.0000
575 D D -0.9600
576 I D 0.0000
577 K D 0.0000
578 C D -0.6052
579 S D -0.7757
580 T D -1.7214
581 R D -3.2579
582 D D -3.1267
583 H D -2.6545
584 E D -2.6558
585 D D -1.1703
586 N D -0.8945
587 N D 0.0568
588 L D 1.5691
589 I D 2.9626
597 T D 1.4967
598 L D 1.3650
599 P D -0.2969
600 H D -0.9622
601 F D 0.0000
602 F D -1.1649
603 K D -1.9684
604 S D -1.4372
605 F D 0.0000
606 E D -2.0571
607 E D -2.2366
608 C D 0.0000
609 I D 0.0000
610 A D -0.3571
611 Y D 0.5279
612 N D 0.0000
613 E D -0.9750
614 T D -0.0275
615 I D 0.1901
616 K D -1.7394
617 C D 0.0000
618 R D -1.6370
619 R D -1.7389
620 S D 0.0000
621 A D 0.0000
622 T D 0.0000
623 R D -0.7143
624 F D 0.0000
625 L D 0.0000
626 W D -0.1791
627 N D 0.0000
628 L D 0.0000
629 R D 0.0000
630 L D -0.1897
631 G D 0.0092
632 T D 0.0000
633 I D 0.6481
634 L D 1.8484
647 I D 2.2759
648 I D 2.5382
649 T D 0.0000
650 V D 0.0000
651 D D 1.3647
652 N D 0.2826
653 E D 0.0000
654 L D 0.0000
655 K D -0.6753
656 K D -1.6381
657 I D 0.0000
658 L D 0.0000
659 E D -1.3153
660 Q D -1.4188
661 I D -0.7567
662 K D 0.0000
678 S D 0.0000
679 T D 0.0000
680 I D -0.0599
681 K D -1.0268
682 L D 0.6718
683 D D -0.2895
684 Y D 0.0000
685 F D 0.0000
686 S D 0.0000
687 I D 0.0000
688 L D 0.0000
689 H D 0.0000
690 A D 0.0000
691 F D 0.0000
692 E D -1.1772
693 L D 0.0000
694 L D 0.0000
695 N D -0.9763
696 L D -1.1378
697 Y D 0.0000
698 D D -1.8484
699 P D -1.5234
700 Y D 0.0000
701 L D 0.0000
702 K D -1.7909
703 L D -0.7524
704 I D 0.0000
705 L D -0.3944
706 S D -0.5676
707 L D 0.0000
708 L D 0.0000
709 A D -0.7686
710 K D -1.3356
711 D D -2.2509
712 K D -1.5590
713 I D -0.7710
714 K D -1.6989
715 L D 0.0000
716 R D 0.0000
717 S D -1.1221
718 T D -0.9593
719 A D 0.0000
720 I D 0.0000
721 K D -1.5000
722 C D 0.0000
723 L D 0.0000
724 S D 0.0000
725 M D -0.2921
726 L D 0.0000
727 A D 0.0000
728 S D -0.4217
729 K D -0.9172
730 D D -0.9081
731 K D -1.3210
732 V D -0.5697
733 I D 0.0000
734 L D -0.6854
735 S D -0.9369
736 N D -1.5309
737 P D -1.2718
738 M D -0.7471
739 V D 0.0000
740 K D -1.9356
741 E D -2.6042
742 T D 0.0000
743 I D 0.0000
744 H D -2.8587
745 R D -3.3541
746 R D 0.0000
747 L D 0.0000
748 N D -2.8605
749 D D -2.5944
750 S D -1.8869
751 S D -0.7741
752 A D -0.3232
753 S D -0.4895
754 V D 0.0000
755 K D 0.0000
756 D D -0.8868
757 A D -0.9951
758 I D 0.0000
759 L D 0.0000
760 D D -0.8292
761 L D 0.0000
762 V D 0.0000
763 S D -0.2500
764 I D 0.6279
765 N D 0.2023
766 S D -0.0342
767 S D -0.1273
768 Y D 0.0000
769 F D 0.6077
770 E D -1.0830
771 F D 0.0000
772 Y D 0.0000
773 Q D -1.2585
774 Q D -1.5012
775 I D 0.0000
776 N D 0.0000
777 N D -1.1472
778 N D -1.6507
779 Y D 0.0000
780 N D -1.7763
781 D D 0.0000
782 D D -0.9248
783 S D 0.1452
784 I D 0.9889
785 M D 0.9471
786 V D 0.0000
787 R D 0.0000
788 K D -0.5198
789 H D -0.8815
790 V D 0.0000
791 L D 0.0000
792 R D -2.4165
793 I D 0.0000
794 N D 0.0000
795 E D -2.4064
796 K D -2.6666
797 M D 0.0000
798 Y D -2.0193
799 D D -3.2532
800 E D -3.2924
801 T D -1.6698
802 N D -2.1567
803 D D -1.0677
804 I D 1.7926
805 V D 2.2786
806 T D 1.1872
807 K D 0.0000
808 V D 1.4600
809 Y D 1.7912
810 V D 0.0000
811 I D 0.0000
812 A D 0.1796
813 R D 0.0560
814 I D 0.0000
815 L D 0.0000
816 M D -0.6754
817 K D 0.0000
818 I D 0.0000
819 E D -2.2781
820 D D -3.0868
821 E D -3.8242
822 E D -3.1154
823 D D -3.3629
824 N D -2.4581
825 I D 0.0000
826 I D 0.0000
827 D D -1.0203
828 M D -0.2706
829 A D 0.0000
830 R D 0.1534
831 L D 0.9474
832 I D 0.3777
833 L D 0.0000
834 L D 0.0000
835 N D -0.1899
836 R D 0.0000
837 W D 0.0000
838 I D 0.0000
839 L D -0.2673
840 K D -0.8626
841 V D 0.0000
842 H D -1.3036
843 E D -2.0892
844 V D -1.7389
845 L D -0.8784
846 D D -2.4787
847 Q D -3.1004
848 P D -2.8055
849 E D -3.7641
850 K D -3.4903
851 L D 0.0000
852 K D -3.4184
853 E D -3.0993
854 I D -1.2119
855 S D 0.0000
856 S D -0.9286
857 S D -0.3090
858 V D 0.0000
859 L D 0.0000
860 L D 0.1965
861 V D 0.0000
862 M D 0.0000
863 S D 0.0000
864 R D -0.2650
865 V D 0.0000
866 A D 0.0000
867 I D 0.3627
868 M D 0.3529
869 N D -0.9358
870 E D -0.9331
871 K D -0.8486
872 C D 0.0000
873 S D 0.0000
874 Q D 0.0000
875 L D 0.0000
876 F D 0.0000
877 D D 0.0000
878 L D 0.0000
879 F D 0.0000
880 L D 0.0000
881 N D 0.0000
882 F D 0.0000
883 Y D 0.0000
884 L D 0.0000
885 L D 0.0000
886 N D -1.3873
887 K D -1.4919
888 E D -2.5497
889 A D -1.7807
890 H D -1.9057
891 S D -2.3813
892 K D -3.8452
893 E D -3.7419
894 A D -2.6403
895 Y D 0.0000
896 D D -3.7874
897 K D -3.3727
898 I D -1.5870
899 T D -1.4581
900 H D -1.6889
901 V D 0.0000
902 L D 0.0000
903 T D 0.0980
904 I D 0.3569
905 L D 0.0000
906 T D 0.0000
907 D D -1.5932
908 F D -0.8312
909 L D 0.0000
910 V D 0.0000
911 Q D -1.3441
912 K D -1.2961
913 I D 0.0000
914 V D -0.6586
915 E D -1.9230
916 L D -0.8146
917 N D -0.4710
927 I D 1.7203
928 V D 1.6492
929 D D 0.4126
930 K D 0.0000
931 Q D 0.0000
932 N D 0.0000
933 F D 0.0000
934 L D 0.0000
935 N D 0.0000
936 L D 0.0000
937 L D 0.0000
938 A D 0.0000
939 K D 0.0000
940 F D 0.0000
941 A D 0.0000
942 D D 0.0000
943 S D 0.0000
944 T D -1.0475
945 V D 0.0000
946 S D 0.0000
947 F D -0.5139
948 L D 0.0000
949 T D -2.4587
950 K D -3.4466
951 D D -3.2190
952 H D 0.0000
953 I D 0.0000
954 T D -1.4791
955 A D -0.5437
956 L D 0.0000
957 Y D 0.9709
958 P D 0.5787
959 Y D 0.3245
960 M D 0.0000
961 V D 0.5872
962 S D -0.5803
963 D D -1.9025
966 S D -1.2467
967 D D -1.3449
968 F D 0.0000
969 H D 0.0000
970 Y D -0.2633
971 Y D 0.0000
972 I D 0.0000
973 L D 0.0000
974 Q D 0.0000
975 V D 0.0000
976 F D 0.0000
977 R D 0.0000
978 C D 0.0000
979 T D 0.0000
980 F D 0.0000
981 E D -1.1571
982 K D -0.9268
983 L D -0.4471
984 A D -0.7801
985 N D -1.6795
986 F D 0.0000
987 K D -3.5062
988 Q D -3.3552
989 K D -2.9140
990 F D 0.0000
991 L D 0.0000
992 Y D -0.2395
993 D D 0.0000
994 L D 0.0000
995 E D 0.0000
996 T D 0.7401
997 T D 0.0000
998 L D 0.0000
999 L D 0.4719
1000 S D 0.0196
1001 R D 0.0000
1002 L D -0.2829
1003 P D -0.7769
1004 K D -1.4322
1005 M D 0.0000
1006 N D -1.7252
1007 V D -0.8575
1008 R D -0.5782
1009 E D -0.6769
1010 I D 0.0000
1011 D D 0.0000
1012 E D 0.0000
1013 A D 0.0000
1014 M D 0.0000
1015 P D 0.0000
1016 L D 0.0000
1017 I D 0.4517
1018 W D -0.0008
1019 S D 0.0000
1020 V D 0.0000
1021 A D 0.0000
1022 T D -1.2975
1023 H D -1.7583
1024 R D -2.2108
1025 H D -2.4678
1026 D D -2.9480
1027 T D 0.0000
1028 A D -2.1126
1029 R D -2.1766
1030 V D 0.0000
1031 A D -1.9198
1032 K D -2.3038
1033 A D -1.0731
1034 C D 0.0000
1035 S D -1.3082
1036 S D -0.8129
1037 C D 0.0000
1038 L D 0.0000
1039 S D -0.9345
1040 H D -1.1469
1041 L D 0.0000
1042 H D -1.6646
1043 P D -1.5518
1044 Y D 0.0000
1045 I D 0.0000
1046 N D -2.2118
1047 K D -2.9047
1048 A D 0.0000
1049 N D -2.5402
1059 G D -1.6266
1060 K D -2.2434
1061 L D 0.0000
1062 Q D -1.3402
1063 R D -2.1194
1064 L D -0.9612
1065 I D 0.0000
1066 Y D 0.0000
1067 L D 0.0000
1068 S D 0.0000
1069 T D 0.0000
1070 G D 0.0000
1071 F D 0.0000
1072 A D 0.0000
1073 R D 0.0000
1074 F D 0.0000
1075 C D -0.0833
1076 F D -0.3863
1077 P D -1.2269
1078 K D -2.2570
1090 G D -1.3912
1091 E D -1.7134
1092 T D -1.4824
1093 L D 0.0000
1094 Y D 0.0000
1095 E D -3.0381
1096 H D -2.4546
1097 I D 0.0000
1098 T D 0.0000
1099 K D -2.4265
1100 C D 0.0000
1101 L D 0.0000
1102 L D -0.6509
1103 V D -0.8310
1104 L D 0.0000
1105 S D 0.0000
1106 K D -1.8637
1107 D D -1.6059
1108 K D -0.4768
1109 I D 1.2794
1110 T D 0.1419
1111 H D 0.2229
1112 V D 0.9736
1113 I D -0.1430
1114 R D 0.0000
1115 R D -0.4296
1116 V D 0.0000
1117 A D 0.0000
1118 V D 0.0000
1119 K D -0.4050
1120 N D 0.0000
1121 L D 0.0000
1122 T D 0.0000
1123 K D 0.0000
1124 L D 0.0000
1125 C D 0.0000
1126 G D -0.4672
1127 N D -0.5971
1128 H D -1.1752
1129 P D -1.3020
1130 K D -2.8962
1131 L D 0.0000
1132 F D -1.3853
1133 N D -2.5202
1134 S D -2.5427
1135 R D -2.8540
1136 H D -2.1336
1137 V D 0.0000
1138 L D -1.4799
1139 H D -1.8605
1140 L D 0.0000
1141 L D 0.0000
1142 D D -1.5315
1143 K D -1.4854
1144 E D 0.0000
1145 F D -1.6699
1146 Q D -2.2593
1147 S D -1.3330
1148 D D -1.8490
1149 Q D -1.8293
1150 L D 0.0000
1151 D D -1.4750
1152 I D 0.0000
1153 K D 0.0000
1154 L D -0.3319
1155 V D -0.0427
1156 I D 0.0000
1157 L D 0.0000
1158 E D -0.3503
1159 S D -0.1404
1160 L D 0.0000
1161 Y D -0.1080
1162 D D 0.0000
1163 L D 0.0000
1164 F D 0.0000
1165 L D 0.0000
1166 L D 0.0000
1167 E D 0.0000
1168 E D -0.1628
1169 R D 0.0000
1170 K D -0.6795
1171 S D 0.0000
1172 V D -0.6828
1173 R D 0.0000
1174 N D -1.3847
1175 T D -1.1520
1176 G D 0.0000
1177 V D 0.0000
1178 N D -0.7344
1179 S D -1.3383
1180 T D -0.4910
1181 L D 0.5933
1182 S D -0.3531
1183 S D -0.7837
1184 N D -0.8202
1203 G D -0.1473
1204 V D 0.9694
1205 C D 0.4613
1206 S D 0.6099
1207 A D 0.1937
1208 L D 0.0000
1209 A D 0.0000
1210 T D -0.2951
1211 R D -0.6437
1212 F D 0.0000
1213 L D -0.8211
1214 D D -2.0514
1215 N D 0.0000
1216 I D 0.0000
1217 L D -0.6147
1218 Q D -1.2741
1219 L D 0.0000
1220 C D 0.0000
1221 L D -0.1495
1222 L D -0.5782
1223 R D -1.7244
1224 D D -1.5509
1225 L D -0.3298
1226 K D -1.0828
1227 N D 0.0000
1228 S D 0.0000
1229 L D -0.0920
1230 V D -0.1002
1231 A D 0.0000
1232 I D 0.0000
1233 R D -0.6643
1234 L D 0.0000
1235 L D 0.0000
1236 K D -0.6398
1237 L D 0.0000
1238 I D 0.0000
1239 L D 0.0000
1240 K D -0.1016
1241 F D 1.1839
1242 G D 0.1182
1243 Y D 0.4803
1244 T D 0.0000
1245 N D -0.8378
1246 P D 0.0000
1247 S D -0.5268
1248 H D -0.8501
1249 S D 0.0000
1250 I D 0.0000
1251 P D 0.0000
1252 T D 0.0000
1253 V D 0.0000
1254 I D 0.0000
1255 A D 0.0000
1256 L D 0.0000
1257 F D 0.0000
1258 A D 0.0000
1259 S D 0.0000
1260 T D -0.4973
1261 S D -0.2095
1262 Q D -1.0251
1263 Y D 0.2552
1264 I D 0.0000
1265 R D -1.0486
1266 H D -1.2362
1267 V D 0.0000
1268 A D 0.0000
1269 Y D -0.8337
1270 E D -1.7290
1271 L D 0.0000
1272 L D 0.0000
1273 E D -1.7788
1274 D D -1.5078
1275 L D 0.0000
1276 F D 0.0000
1277 E D -2.0448
1278 K D -1.2296
1279 Y D 0.1089
1280 E D -0.6088
1281 T D -0.0412
1282 L D 0.2955
1283 V D 0.0000
1284 F D -0.3175
1285 S D -0.4253
1286 S D 0.0000
1287 L D 0.0000
1288 S D -1.5235
1289 R D -1.7814
1290 G D 0.0000
1291 V D 0.0000
1292 T D -1.1568
1293 K D -1.3856
1294 A D 0.0000
1295 I D 0.0000
1296 H D -1.5634
1297 Y D 0.0000
1298 S D 0.0000
1299 I D -1.6172
1300 H D -1.8125
1301 T D -1.6773
1302 D D -2.3685
1303 E D -1.9851
1304 K D -1.9801
1305 Y D -0.2536
1306 Y D 0.0000
1307 Y D -1.2175
1308 K D -1.0137
1309 H D 0.0000
1310 D D -0.6336
1311 H D 0.0000
1312 F D 0.0000
1313 L D 0.0000
1314 S D -0.4992
1315 L D -0.5122
1316 L D 0.0000
1317 E D 0.0000
1318 K D -1.7840
1319 L D 0.0000
1320 C D 0.0000
1321 G D -1.4687
1322 T D -1.6252
1323 G D -1.8137
1324 K D -2.1051
1325 K D 0.0000
1326 N D -1.9024
1327 G D 0.0000
1328 P D -1.5677
1329 K D -2.2428
1330 F D 0.0000
1331 F D 0.0000
1332 K D -2.8347
1333 V D 0.0000
1334 L D 0.0000
1335 K D -2.1959
1336 R D -2.8168
1337 I D 0.0000
1338 M D 0.0000
1339 Q D -1.5326
1340 S D -0.7993
1341 Y D 0.5458
1342 L D 1.8325
1355 V D 1.6258
1356 Q D 0.2763
1357 K D -1.1921
1358 S D 0.0000
1359 I D 0.7837
1360 F D 0.1802
1361 V D 0.0000
1362 L D 0.0000
1363 C D 0.4058
1364 T D 0.0000
1365 N D 0.0000
1366 I D 0.3047
1367 S D 0.0000
1368 N D -0.3873
1369 I D 0.0000
1370 T D -0.6467
1371 F D 0.0481
1372 V D 0.3054
1373 S D 0.4010
1374 Q D 0.0000
1375 Y D 1.1852
1376 D D 0.4578
1377 L D 0.0000
1378 V D 0.5853
1379 S D -0.1152
1380 L D 0.0000
1381 L D -0.0027
1382 K D -1.4968
1383 T D -0.8783
1384 I D -0.7497
1385 D D -1.9382
1386 L D -0.7034
1387 T D -1.0652
1388 T D -1.8773
1389 D D -3.1770
1390 R D -3.1988
1391 L D 0.0000
1392 K D -2.7065
1393 E D -2.6016
1394 V D -0.4074
1395 I D 0.0000
1396 M D -0.7522
1397 D D -1.8945
1398 E D -1.5469
1413 L D 0.5578
1414 S D 0.1132
1415 G D 0.3313
1416 I D 1.0423
1417 I D 0.0000
1418 L D 0.2009
1419 I D 0.8635
1420 Q D -0.4595
1421 L D 0.1829
1422 S D 0.0000
1423 L D -0.4058
1424 Q D -1.0288
1425 D D -0.3816
1426 L D 0.0000
1427 G D -0.5096
1428 T D -0.1794
1429 Y D 0.0000
1430 L D 0.0000
1431 L D 0.7511
1432 H D -1.0831
1433 L D 0.0000
1434 Y D -0.6051
1448 E D -2.2316
1449 S D -1.7065
1450 E D -1.7186
1451 L D -0.4181
1452 K D -2.3896
1453 N D 0.0000
1454 K D -2.3101
1455 Q D -1.3072
1466 F D 0.2197
1467 S D 0.0000
1468 A D 0.0000
1469 Q D -0.6126
1470 L D 0.7818
1471 E D 0.0000
1472 N D -1.0462
1473 I D 1.0266
1474 E D -0.1691
1475 Q D -1.2289
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CABS-flex predictions of flexibility of input structure

In dynamic mode, A3D analysis is performed on the set of models reflecting fluctuations of the input structure (predicted by CABS-flex method, models are numbered from 0 to 11) and the input model. Their A3D scores are provided below in the table.
The right panel presents comparison of the most aggregation prone model (with the highest A3D score, -0.505 in this case) with the input model (the most aggregation prone model in blue, input in red) and RMSF plot which shows the extent of residue fluctuations in Angstroms (predicted by CABS-flex).

Model
Average A3D Score
model_6 -0.505 View CSV PDB
model_0 -0.5102 View CSV PDB
model_1 -0.5137 View CSV PDB
model_3 -0.5212 View CSV PDB
model_8 -0.5234 View CSV PDB
model_11 -0.5385 View CSV PDB
model_4 -0.539 View CSV PDB
model_5 -0.5411 View CSV PDB
model_2 -0.5421 View CSV PDB
model_7 -0.551 View CSV PDB
model_10 -0.5511 View CSV PDB
model_9 -0.5641 View CSV PDB
input -0.7991 View CSV PDB
 

Laboratory of Theory of Biopolymers 2018