Chain sequence(s) |
L: DIVLTQSPATLSVTPGESVSLSCRASQSISNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYYCQQSNSWPLTFGAGTKLELKR
input PDB |
Selected Chain(s) | L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | RA109L |
Energy difference between WT (input) and mutated protein (by FoldX) | 0.922939 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:54) [INFO] FoldX: Starting FoldX energy minimalization (00:01:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:27) [INFO] Movie: Creting movie with webm format (00:02:39) [INFO] Main: Simulation completed successfully. (00:02:40) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
2 | D | L | -1.0422 | |
3 | I | L | 0.0000 | |
4 | V | L | 1.2736 | |
5 | L | L | 0.0000 | |
6 | T | L | -0.2157 | |
7 | Q | L | 0.0000 | |
8 | S | L | -0.6249 | |
9 | P | L | -0.3492 | |
10 | A | L | -0.2439 | |
11 | T | L | -0.6361 | |
12 | L | L | -0.4131 | |
13 | S | L | -0.7937 | |
14 | V | L | 0.0000 | |
15 | T | L | -1.3013 | |
16 | P | L | -1.6633 | |
17 | G | L | -2.0409 | |
18 | E | L | -2.4761 | |
19 | S | L | -1.9886 | |
20 | V | L | 0.0000 | |
21 | S | L | -0.5566 | |
22 | L | L | 0.0000 | |
23 | S | L | -0.9318 | |
24 | C | L | 0.0000 | |
25 | R | L | -2.3932 | |
26 | A | L | 0.0000 | |
27 | S | L | -1.1372 | |
28 | Q | L | -1.7782 | |
29 | S | L | -1.6727 | |
30 | I | L | 0.0000 | |
31 | S | L | -1.4425 | |
32 | N | L | -1.7614 | |
33 | N | L | -1.1639 | |
34 | L | L | 0.0000 | |
35 | H | L | 0.0000 | |
36 | W | L | 0.0000 | |
37 | Y | L | -0.1250 | |
38 | Q | L | 0.0000 | |
39 | Q | L | -1.6311 | |
40 | K | L | -2.1477 | |
41 | S | L | -1.6197 | |
42 | H | L | -2.2739 | |
43 | E | L | -2.9578 | |
44 | S | L | -1.8568 | |
45 | P | L | -1.4424 | |
46 | R | L | -1.3137 | |
47 | L | L | -0.0906 | |
48 | L | L | 0.0000 | |
49 | I | L | 0.0000 | |
50 | K | L | -0.8505 | |
51 | Y | L | -0.5192 | |
52 | A | L | 0.0000 | |
53 | S | L | -1.0677 | |
54 | Q | L | -1.4412 | |
55 | S | L | -0.6053 | |
56 | I | L | 0.0530 | |
57 | S | L | -0.2185 | |
58 | G | L | -0.3370 | |
59 | I | L | 0.0221 | |
60 | P | L | -0.2806 | |
61 | S | L | -0.6472 | |
62 | R | L | -1.1449 | |
63 | F | L | 0.0000 | |
64 | S | L | -0.8754 | |
65 | G | L | 0.0000 | |
66 | S | L | -0.8343 | |
67 | G | L | -1.1843 | |
68 | S | L | -1.3501 | |
69 | G | L | -1.5400 | |
70 | T | L | -1.9470 | |
71 | D | L | -2.2402 | |
72 | F | L | 0.0000 | |
73 | T | L | -0.8424 | |
74 | L | L | 0.0000 | |
75 | S | L | -0.7262 | |
76 | I | L | 0.0000 | |
77 | N | L | -2.2334 | |
78 | S | L | -2.1320 | |
79 | V | L | 0.0000 | |
80 | E | L | -2.5098 | |
81 | T | L | -1.5879 | |
82 | E | L | -2.3381 | |
83 | D | L | 0.0000 | |
84 | F | L | -0.9200 | |
85 | G | L | 0.0000 | |
86 | M | L | -0.5830 | |
87 | Y | L | 0.0000 | |
88 | Y | L | 0.4617 | |
89 | C | L | 0.0000 | |
90 | Q | L | 0.0000 | |
91 | Q | L | 0.0000 | |
92 | S | L | -0.0422 | |
93 | N | L | -1.1249 | |
94 | S | L | -0.3746 | |
95 | W | L | 0.7853 | |
96 | P | L | 0.6780 | |
97 | L | L | 1.7904 | |
98 | T | L | 1.6468 | |
99 | F | L | 2.5112 | |
100 | G | L | 1.0227 | |
101 | A | L | 0.5881 | |
102 | G | L | 0.0950 | |
103 | T | L | 0.0000 | |
104 | K | L | -1.0937 | |
105 | L | L | 0.0000 | |
106 | E | L | -1.2834 | |
107 | L | L | -0.2199 | |
108 | K | L | -1.3531 | |
109 | A | L | -0.6086 | mutated: RA109L |