Project name: fab97d0ad2e0b9b [mutate: RA109L]

Status: done

Started: 2020-04-05 16:29:50
Settings
Chain sequence(s) L: DIVLTQSPATLSVTPGESVSLSCRASQSISNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYYCQQSNSWPLTFGAGTKLELKR
input PDB
Selected Chain(s) L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues RA109L
Energy difference between WT (input) and mutated protein (by FoldX) 0.922939 kcal/mol
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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with L chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:54)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:01:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:27)
[INFO]       Movie:    Creting movie with webm format                                              (00:02:39)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:40)
Show buried residues

Minimal score value
-2.9578
Maximal score value
2.5112
Average score
-0.6316
Total score value
-68.2139

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 D L -1.0422
3 I L 0.0000
4 V L 1.2736
5 L L 0.0000
6 T L -0.2157
7 Q L 0.0000
8 S L -0.6249
9 P L -0.3492
10 A L -0.2439
11 T L -0.6361
12 L L -0.4131
13 S L -0.7937
14 V L 0.0000
15 T L -1.3013
16 P L -1.6633
17 G L -2.0409
18 E L -2.4761
19 S L -1.9886
20 V L 0.0000
21 S L -0.5566
22 L L 0.0000
23 S L -0.9318
24 C L 0.0000
25 R L -2.3932
26 A L 0.0000
27 S L -1.1372
28 Q L -1.7782
29 S L -1.6727
30 I L 0.0000
31 S L -1.4425
32 N L -1.7614
33 N L -1.1639
34 L L 0.0000
35 H L 0.0000
36 W L 0.0000
37 Y L -0.1250
38 Q L 0.0000
39 Q L -1.6311
40 K L -2.1477
41 S L -1.6197
42 H L -2.2739
43 E L -2.9578
44 S L -1.8568
45 P L -1.4424
46 R L -1.3137
47 L L -0.0906
48 L L 0.0000
49 I L 0.0000
50 K L -0.8505
51 Y L -0.5192
52 A L 0.0000
53 S L -1.0677
54 Q L -1.4412
55 S L -0.6053
56 I L 0.0530
57 S L -0.2185
58 G L -0.3370
59 I L 0.0221
60 P L -0.2806
61 S L -0.6472
62 R L -1.1449
63 F L 0.0000
64 S L -0.8754
65 G L 0.0000
66 S L -0.8343
67 G L -1.1843
68 S L -1.3501
69 G L -1.5400
70 T L -1.9470
71 D L -2.2402
72 F L 0.0000
73 T L -0.8424
74 L L 0.0000
75 S L -0.7262
76 I L 0.0000
77 N L -2.2334
78 S L -2.1320
79 V L 0.0000
80 E L -2.5098
81 T L -1.5879
82 E L -2.3381
83 D L 0.0000
84 F L -0.9200
85 G L 0.0000
86 M L -0.5830
87 Y L 0.0000
88 Y L 0.4617
89 C L 0.0000
90 Q L 0.0000
91 Q L 0.0000
92 S L -0.0422
93 N L -1.1249
94 S L -0.3746
95 W L 0.7853
96 P L 0.6780
97 L L 1.7904
98 T L 1.6468
99 F L 2.5112
100 G L 1.0227
101 A L 0.5881
102 G L 0.0950
103 T L 0.0000
104 K L -1.0937
105 L L 0.0000
106 E L -1.2834
107 L L -0.2199
108 K L -1.3531
109 A L -0.6086 mutated: RA109L
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Laboratory of Theory of Biopolymers 2018