Project name: 18c24bfa6027f6a

Status: done

submitted: 2018-10-09 06:56:02, status changed: 2018-10-09 10:33:14

Project settings
Peptide sequence SKRSKRKRT
Simulation mc cycles50
Peptide secondary structure psipred CHHHHHHCC
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 36.7368 5.06304 14.8714 186
cluster_2.pdb ( medoid) 34.1127 2.90215 7.81031 99
cluster_3.pdb ( medoid) 31.7679 4.81619 17.0868 153
cluster_4.pdb ( medoid) 24.4003 5.77862 15.0254 141
cluster_5.pdb ( medoid) 19.3838 6.29391 16.5919 122
cluster_6.pdb ( medoid) 13.3666 5.46139 12.4118 73
cluster_7.pdb ( medoid) 13.0463 3.066 7.29874 40
cluster_8.pdb ( medoid) 8.37591 10.9839 29.6605 92
cluster_9.pdb ( medoid) 7.71704 8.16375 19.0004 63
cluster_10.pdb ( medoid) 3.27752 9.45837 16.2005 31

Laboratory of Theory of Biopolymers 2015