Project name: 1h6w bound default 2 runA SLNYIIKVKE ss: CCEEEEECCC

Status: done

submitted: 2015-02-23 11:18:25, status changed: 2015-03-13 10:51:17

Project settings
Peptide sequence SLNYIIKVKE
Simulation mc cycles50
Peptide secondary structure CCEEEEECCC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
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model_7 Download
model_8 Download
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model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
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replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 32.6502 3.21591 18.153 105
cluster_2.pdb ( medoid) 30.3507 3.65724 21.0947 111
cluster_3.pdb ( medoid) 21.5345 4.04003 16.1326 87
cluster_4.pdb ( medoid) 14.8259 7.75672 37.5281 115
cluster_5.pdb ( medoid) 14.6251 7.52134 20.201 110
cluster_6.pdb ( medoid) 7.97946 10.4017 26.479 83
cluster_7.pdb ( medoid) 5.53521 8.85242 24.0964 49
cluster_8.pdb ( medoid) 5.01093 9.37949 23.2003 47
cluster_9.pdb ( medoid) 4.2653 13.5981 33.1072 58
cluster_10.pdb ( medoid) 2.44083 18.846 47.7305 46
Laboratory of Theory of Biopolymers 2015