Project name: test

Status: done

submitted: 2018-01-13 15:22:21, status changed: 2018-01-13 18:12:47

Project settings
Simulation mc cycles50
Peptide secondary structure psipred CCCHHHHHHHHHHHHCHHHHHCCC
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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 40.827 2.57183 23.3984 105
cluster_2.pdb ( medoid) 27.8794 3.87383 20.3505 108
cluster_3.pdb ( medoid) 26.0839 7.5909 26.4537 198
cluster_4.pdb ( medoid) 20.7969 3.12547 18.4699 65
cluster_5.pdb ( medoid) 17.2597 8.80664 33.9255 152
cluster_6.pdb ( medoid) 16.0826 6.28007 19.702 101
cluster_7.pdb ( medoid) 9.4344 11.6595 25.6406 110
cluster_8.pdb ( medoid) 8.0666 12.1489 36.4818 98
cluster_9.pdb ( medoid) 4.22126 7.34378 23.2921 31
cluster_10.pdb ( medoid) 2.93276 10.9112 28.3988 32

Laboratory of Theory of Biopolymers 2015