Project name: 1ihj bound default A TEFCA ss: CCCEC

Status: done

submitted: 2015-02-19 18:28:13, status changed: 2015-03-13 10:52:18

Project settings
Peptide sequence TEFCA
Simulation mc cycles50
Peptide secondary structure CCCEC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 39.8574 1.75626 4.53487 70
cluster_2.pdb ( medoid) 29.9819 3.93571 14.4942 118
cluster_3.pdb ( medoid) 28.1901 6.03049 24.6311 170
cluster_4.pdb ( medoid) 24.7424 2.58666 13.3581 64
cluster_5.pdb ( medoid) 19.5351 8.65108 33.9075 169
cluster_6.pdb ( medoid) 16.0906 5.71762 11.7492 92
cluster_7.pdb ( medoid) 15.0992 7.21891 23.5506 109
cluster_8.pdb ( medoid) 7.78964 10.1417 28.9696 79
cluster_9.pdb ( medoid) 6.42983 9.33151 24.9753 60
cluster_10.pdb ( medoid) 5.87725 11.7402 34.2222 69
Laboratory of Theory of Biopolymers 2015