Project name: 2p1k bound default 2 runA SATSAKATQTD ss: CCEEEEEEECC

Status: done

submitted: 2015-02-23 11:18:43, status changed: 2015-03-13 10:52:38

Project settings
Peptide sequence SATSAKATQTD
Simulation mc cycles50
Peptide secondary structure CCEEEEEEECC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
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model_4 Download
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model_7 Download
model_8 Download
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model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
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replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 35.1529 6.4575 30.2264 227
cluster_2.pdb ( medoid) 22.4157 5.21955 22.3617 117
cluster_3.pdb ( medoid) 20.5028 7.0722 20.4345 145
cluster_4.pdb ( medoid) 18.1522 6.39041 17.4664 116
cluster_5.pdb ( medoid) 9.34586 7.91795 23.5312 74
cluster_6.pdb ( medoid) 8.97356 6.24056 19.9125 56
cluster_7.pdb ( medoid) 7.4808 9.89199 20.7873 74
cluster_8.pdb ( medoid) 6.99225 10.7262 23.3946 75
cluster_9.pdb ( medoid) 6.84429 8.62032 20.5163 59
cluster_10.pdb ( medoid) 6.456 8.829 24.0284 57
Laboratory of Theory of Biopolymers 2015