Project name: 2294b4fd015c60d

Status: done

submitted: 2017-09-14 05:33:48, status changed: 2017-09-14 06:56:36

Project settings
Peptide sequence YTIVITP
Simulation mc cycles50
Peptide secondary structure psipred CEEEECC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

Download all files
Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 50.7298 2.10921 14.9116 107
cluster_2.pdb ( medoid) 30.0906 3.1239 7.19074 94
cluster_3.pdb ( medoid) 27.009 4.66511 25.0982 126
cluster_4.pdb ( medoid) 23.1566 5.95943 29.9018 138
cluster_5.pdb ( medoid) 23.009 4.95459 21.0259 114
cluster_6.pdb ( medoid) 19.3263 2.79412 16.0731 54
cluster_7.pdb ( medoid) 11.6934 10.6043 36.0481 124
cluster_8.pdb ( medoid) 6.00181 14.8289 33.1801 89
cluster_9.pdb ( medoid) 5.86436 14.4943 30.6062 85
cluster_10.pdb ( medoid) 4.83717 14.2646 42.7014 69

Laboratory of Theory of Biopolymers 2015