Project name: H18E5OK6A01 4nqv

Status: done

submitted: 2018-01-02 07:27:21, status changed: 2018-01-03 23:53:49

Project settings
Peptide sequence FTVYVFCFL
Simulation mc cycles200
Peptide secondary structure psipred CEEEEEEEC
Unlikely to bind regions
0:B - 99:B 179:A - 274:A
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 80.3888 2.0774 8.36151 167
cluster_2.pdb ( medoid) 68.221 1.65638 14.0416 113
cluster_3.pdb ( medoid) 54.9128 1.58433 6.01621 87
cluster_4.pdb ( medoid) 35.5253 2.61785 4.90405 93
cluster_5.pdb ( medoid) 31.9006 4.13785 15.0521 132
cluster_6.pdb ( medoid) 23.0807 4.98252 30.3501 115
cluster_7.pdb ( medoid) 17.5333 4.04945 35.4601 71
cluster_8.pdb ( medoid) 15.1435 2.11312 3.91133 32
cluster_9.pdb ( medoid) 12.7643 11.0464 35.5193 141
cluster_10.pdb ( medoid) 2.31884 21.1313 62.6067 49

Laboratory of Theory of Biopolymers 2015