Project name: bddb4481dd00fbc

Status: done

submitted: 2018-01-11 21:18:24, status changed: 2018-01-11 22:12:14

Project settings
Peptide sequence WEFWEF
Simulation mc cycles50
Peptide secondary structure CCCCCC
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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 35.0503 3.45219 20.3388 121
cluster_2.pdb ( medoid) 28.7877 5.73161 29.6057 165
cluster_3.pdb ( medoid) 26.9785 4.92985 23.7129 133
cluster_4.pdb ( medoid) 25.6983 5.13652 23.6363 132
cluster_5.pdb ( medoid) 20.7263 3.28085 22.917 68
cluster_6.pdb ( medoid) 15.2747 8.70722 34.4428 133
cluster_7.pdb ( medoid) 11.6162 6.62869 24.0801 77
cluster_8.pdb ( medoid) 7.41906 7.27855 18.5068 54
cluster_9.pdb ( medoid) 6.38755 9.86294 24.7829 63
cluster_10.pdb ( medoid) 3.8749 13.9358 30.4418 54

Laboratory of Theory of Biopolymers 2015