Project name: 4cd745e2398813f

Status: done

submitted: 2017-09-12 16:20:19, status changed: 2017-09-13 17:10:25

Project settings
Peptide sequence DEANQRATKMLGSG
Simulation mc cycles50
Peptide secondary structure psipred CHHHHHHHHHHHCC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

Download all files
Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 38.9476 6.31617 19.5838 246
cluster_2.pdb ( medoid) 22.4867 5.46991 29.6328 123
cluster_3.pdb ( medoid) 18.1279 4.35792 10.4079 79
cluster_4.pdb ( medoid) 13.1332 9.97472 55.2274 131
cluster_5.pdb ( medoid) 12.2607 6.44335 15.5574 79
cluster_6.pdb ( medoid) 12.2556 8.64913 32.6333 106
cluster_7.pdb ( medoid) 11.1865 6.6151 14.5462 74
cluster_8.pdb ( medoid) 8.25881 7.87038 17.6131 65
cluster_9.pdb ( medoid) 3.64757 20.8358 50.9245 76
cluster_10.pdb ( medoid) 0.890624 23.579 54.3306 21

Laboratory of Theory of Biopolymers 2015