Project name: 4fec971844ef4b1

Status: done

submitted: 2018-01-13 08:35:34, status changed: 2018-01-13 08:57:15

Project settings
Peptide sequence KYAL
Simulation mc cycles50
Peptide secondary structure psipred CCCC
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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 64.2694 2.73847 16.4997 176
cluster_2.pdb ( medoid) 39.1537 2.29864 13.2635 90
cluster_3.pdb ( medoid) 36.6528 7.80296 38.5653 286
cluster_4.pdb ( medoid) 18.9045 5.23686 24.9104 99
cluster_5.pdb ( medoid) 18.3022 2.84119 6.15948 52
cluster_6.pdb ( medoid) 15.1251 4.42972 16.3973 67
cluster_7.pdb ( medoid) 14.5245 4.75059 20.1532 69
cluster_8.pdb ( medoid) 6.19722 4.03407 11.0757 25
cluster_9.pdb ( medoid) 5.89617 9.66729 27.0083 57
cluster_10.pdb ( medoid) 5.75929 11.1125 31.0632 64

Laboratory of Theory of Biopolymers 2015