Project name: 2p1t bound default 2 runA HKILHRLLQD ss: CHHHHHHHHC

Status: done

submitted: 2015-02-23 11:18:43, status changed: 2015-03-13 11:01:15

Project settings
Peptide sequence HKILHRLLQD
Simulation mc cycles50
Peptide secondary structure CHHHHHHHHC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

Download all files
Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 36.574 2.43342 16.3876 89
cluster_2.pdb ( medoid) 33.7171 5.04195 17.0395 170
cluster_3.pdb ( medoid) 18.8271 6.42691 28.3708 121
cluster_4.pdb ( medoid) 18.7971 7.50115 27.9118 141
cluster_5.pdb ( medoid) 15.6231 9.40916 36.875 147
cluster_6.pdb ( medoid) 14.1542 3.81512 24.506 54
cluster_7.pdb ( medoid) 13.6613 10.0284 40.2138 137
cluster_8.pdb ( medoid) 9.08781 7.15243 16.2931 65
cluster_9.pdb ( medoid) 3.95951 14.6483 42.8839 58
cluster_10.pdb ( medoid) 1.35278 13.306 35.3133 18
Laboratory of Theory of Biopolymers 2015