Project name: 1klu bound default AB GELIGTLNAAKVPAD ss: CEECCCCCCCCCCCC

Status: done

submitted: 2015-02-19 18:28:14, status changed: 2015-03-13 11:03:49

Project settings
Peptide sequence GELIGTLNAAKVPAD
Simulation mc cycles50
Peptide secondary structure CEECCCCCCCCCCCC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

Download all files
Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 61.7507 2.08905 6.50966 129
cluster_2.pdb ( medoid) 59.8506 2.08854 6.30388 125
cluster_3.pdb ( medoid) 57.1015 1.8038 9.70662 103
cluster_4.pdb ( medoid) 36.0692 5.04585 16.9906 182
cluster_5.pdb ( medoid) 14.5176 8.33471 19.2641 121
cluster_6.pdb ( medoid) 14.2612 4.83829 28.1527 69
cluster_7.pdb ( medoid) 8.63777 10.8824 39.5129 94
cluster_8.pdb ( medoid) 5.40148 14.8108 46.5667 80
cluster_9.pdb ( medoid) 3.61715 11.6114 31.7146 42
cluster_10.pdb ( medoid) 3.01373 18.2498 42.0144 55
Laboratory of Theory of Biopolymers 2015