Project name: 666bd642411ceb1

Status: done

submitted: 2018-07-05 12:42:24, status changed: 2018-07-20 18:59:38

Project settings
Peptide sequence CRLIIF
Simulation mc cycles50
Peptide secondary structure psipred CEEEEC
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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

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Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 40.6187 3.44669 23.5667 140
cluster_2.pdb ( medoid) 26.5749 7.07436 25.7415 188
cluster_3.pdb ( medoid) 19.7912 5.81065 33.0427 115
cluster_4.pdb ( medoid) 17.6806 6.22152 15.5917 110
cluster_5.pdb ( medoid) 16.5276 7.98665 40.8311 132
cluster_6.pdb ( medoid) 12.9929 5.6954 22.6506 74
cluster_7.pdb ( medoid) 8.68059 10.8288 38.9286 94
cluster_8.pdb ( medoid) 4.40704 12.0262 33.3577 53
cluster_9.pdb ( medoid) 3.16217 13.282 33.5249 42
cluster_10.pdb ( medoid) 2.69103 19.3235 38.4907 52

Laboratory of Theory of Biopolymers 2015