Project name: 1JWT unbound flexible 0 run A DFEEIPEEYLQ ss: CCCCCCCCCCC

Status: done

submitted: 2015-03-11 11:40:13, status changed: 2015-03-11 19:33:45

Project settings
Peptide sequence DFEEIPEEYLQ
Simulation mc cycles50
Peptide secondary structure CCCCCCCCCCC
Flexible regions
Unlikely to bind regions
Re-submit project
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

Download all files
Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 39.4908 7.06493 41.2824 279
cluster_2.pdb ( medoid) 18.0814 7.90868 38.6447 143
cluster_3.pdb ( medoid) 17.594 3.69444 29.4815 65
cluster_4.pdb ( medoid) 17.1378 8.51918 39.4795 146
cluster_5.pdb ( medoid) 13.6547 9.30082 31.2672 127
cluster_6.pdb ( medoid) 12.7655 4.38682 24.5539 56
cluster_7.pdb ( medoid) 11.7255 5.37289 10.9428 63
cluster_8.pdb ( medoid) 4.74479 14.1207 36.2374 67
cluster_9.pdb ( medoid) 2.14757 8.84722 17.9633 19
cluster_10.pdb ( medoid) 1.97764 17.6978 41.4631 35
Laboratory of Theory of Biopolymers 2015